RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 FAM163AQ96GL9 167 aaPredicted RBP14.8□□□□□ -0.04
PTPN1-202ENST00000541713 KIFC3Q9BVG8 833 aa14.8□□□□□ -0.04
PTPN1-202ENST00000541713 DNAJC17Q9NVM6 304 aaKnown RBP14.8□□□□□ -0.04
PTPN1-202ENST00000541713 TMEM51Q9NW97 253 aa14.8□□□□□ -0.04
PTPN1-202ENST00000541713 SWAP70Q9UH65 585 aa14.8□□□□□ -0.04
PTPN1-202ENST00000541713 ARAP2Q8WZ64 1704 aa14.8□□□□□ -0.04
PTPN1-202ENST00000541713 NDUFAB1O14561 156 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 GCLMP48507 274 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 NSMFQ6X4W1 530 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 AGBL1Q96MI9 1066 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 GPRC5CQ9NQ84 441 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 KDM3AQ9Y4C1 1321 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 CENPFP49454 3210 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 IRAK1P51617 712 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 PSMD2Q13200 908 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 PRAMEF18Q5VWM3 479 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 KRT27Q7Z3Y8 459 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 CPNE8Q86YQ8 564 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 IFT20Q8IY31 132 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 BTBD6Q96KE9 485 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 WRAP73Q9P2S5 460 aaPredicted RBP14.79□□□□□ -0.04
PTPN1-202ENST00000541713 TTI1O43156 1089 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 GJC1P36383 396 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 PPP1R2P41236 205 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 CLK2P49760 499 aaKnown RBP14.79□□□□□ -0.04
PTPN1-202ENST00000541713 GBP6Q6ZN66 633 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 CCDC25Q86WR0 208 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 GLG1Q92896 1179 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 KAT5Q92993 513 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 CRAMP1Q96RY5 1269 aa14.79□□□□□ -0.04
PTPN1-202ENST00000541713 TMOD1P28289 359 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 DLG4P78352 724 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 NAB2Q15742 525 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 CBWD6Q4V339 395 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 CBWD3Q5JTY5 395 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 CBWD5Q5RIA9 395 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 TSPYL1Q9H0U9 437 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 TCEAL9Q9UHQ7 104 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 NAGPAQ9UK23 515 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 DNAJC12Q9UKB3 198 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 PTPN22Q9Y2R2 807 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 IGKV6D-41A0A0C4DH26 115 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 EVI5O60447 810 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 ADCY1Q08828 1119 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
PTPN1-202ENST00000541713 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 RINT1Q6NUQ1 792 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 METTL13Q8N6R0 699 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 AENQ8WTP8 325 aaKnown RBP14.78□□□□□ -0.04
PTPN1-202ENST00000541713 ZNF577Q9BSK1 485 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 PLAAQ9Y263 795 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 FGGP02679 453 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 H2AFZP0C0S5 128 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 ALAS1P13196 640 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 GALCP54803 685 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 PRKG1Q13976 671 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 ASTE1Q2TB18 679 aaPredicted RBP14.78□□□□□ -0.04
PTPN1-202ENST00000541713 FIGNQ5HY92 759 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 H2AFVQ71UI9 128 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 KCNMB3Q9NPA1 279 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 ZNF277Q9NRM2 450 aaPredicted RBP14.78□□□□□ -0.04
PTPN1-202ENST00000541713 PCDHA2Q9Y5H9 948 aa14.78□□□□□ -0.04
PTPN1-202ENST00000541713 SLCO1A2P46721 670 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 EPHB4P54760 987 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 SLFN12Q8IYM2 578 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 SLC20A1Q8WUM9 679 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 RPGRIP1Q96KN7 1286 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 POP1Q99575 1024 aaKnown RBP14.77□□□□□ -0.04
PTPN1-202ENST00000541713 LRRC4CQ9HCJ2 640 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 PLCB1Q9NQ66 1216 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.04
PTPN1-202ENST00000541713 ATP8A1Q9Y2Q0 1164 aa14.77□□□□□ -0.04
PTPN1-202ENST00000541713 SHTN1A0MZ66 631 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 H0YIN7 160 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 K7ENM7 598 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 SART1O43290 800 aaKnown RBP14.77□□□□□ -0.05
PTPN1-202ENST00000541713 CALUO43852 315 aaPredicted RBP14.77□□□□□ -0.05
PTPN1-202ENST00000541713 NPR1P16066 1061 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 GCFC2P16383 781 aaKnown RBP14.77□□□□□ -0.05
PTPN1-202ENST00000541713 EIF2AK2P19525 551 aaKnown RBP14.77□□□□□ -0.05
PTPN1-202ENST00000541713 VPS41P49754 854 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.05
PTPN1-202ENST00000541713 ETNPPLQ8TBG4 499 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 CERKQ8TCT0 537 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 RNPC3Q96LT9 517 aaKnown RBP14.77□□□□□ -0.05
PTPN1-202ENST00000541713 FAM118BQ9BPY3 351 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 PODXL2Q9NZ53 605 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 SCN7AQ01118 1682 aa14.77□□□□□ -0.05
PTPN1-202ENST00000541713 CCDC169A6NNP5 214 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 STAT1P42224 750 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 STAT2P52630 851 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 FAM182AQ5T1J6 154 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 IRF2BP2Q7Z5L9 587 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 MMGT1Q8N4V1 131 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 SAAL1Q96ER3 474 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 NEUROG2Q9H2A3 272 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 GANQ9H2C0 597 aa14.76□□□□□ -0.05
PTPN1-202ENST00000541713 UBE2TQ9NPD8 197 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms