RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ATP2B1P20020 1258 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 KIAA0319LQ8IZA0 1049 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 PHOSPHO2Q8TCD6 241 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 CDX2Q99626 313 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-212ENST00000540230 NAP1L4Q99733 375 aaKnown RBP16.96■□□□□ 0.31
UBE3B-212ENST00000540230 SH2D3AQ9BRG2 576 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.31
UBE3B-212ENST00000540230 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 AGO3Q9H9G7 860 aaKnown RBP16.96■□□□□ 0.31
UBE3B-212ENST00000540230 WRAP73Q9P2S5 460 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-212ENST00000540230 MSRAQ9UJ68 235 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 PCDHA11Q9Y5I1 949 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 PRUNE2Q8WUY3 3088 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 MYO9BQ13459 2157 aa16.96■□□□□ 0.31
UBE3B-212ENST00000540230 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.96■□□□□ 0.3
UBE3B-212ENST00000540230 SAFBQ15424 915 aaKnown RBP eCLIP16.96■□□□□ 0.3
UBE3B-212ENST00000540230 SPRED2Q7Z698 418 aa16.96■□□□□ 0.3
UBE3B-212ENST00000540230 MYLIPQ8WY64 445 aa16.96■□□□□ 0.3
UBE3B-212ENST00000540230 SEPT8Q92599 483 aa16.96■□□□□ 0.3
UBE3B-212ENST00000540230 FAM167AQ96KS9 214 aa16.96■□□□□ 0.3
UBE3B-212ENST00000540230 PPP1R16BQ96T49 567 aa16.96■□□□□ 0.3
UBE3B-212ENST00000540230 CDHR5Q9HBB8 845 aa16.96■□□□□ 0.3
UBE3B-212ENST00000540230 TRPV2Q9Y5S1 764 aa16.96■□□□□ 0.3
UBE3B-212ENST00000540230 LCHNA4D1U4 455 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 NEMFO60524 1076 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 CA3P07451 260 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 CLCN3P51790 818 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 NCAPH2Q6IBW4 605 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 FAM117BQ6P1L5 589 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 LRRC71Q8N4P6 559 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 LINC01465Q8N7H1 131 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 CEP89Q96ST8 783 aa16.95■□□□□ 0.3
UBE3B-212ENST00000540230 FOXP1Q9H334 677 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-212ENST00000540230 SEPT9Q9UHD8 586 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-212ENST00000540230 MARCH6O60337 910 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 VTNP04004 478 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 GJB2P29033 226 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 CD52P31358 61 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 MCM7P33993 719 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 NBR1Q14596 966 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 TARBP2Q15633 366 aaKnown RBP16.94■□□□□ 0.3
UBE3B-212ENST00000540230 CALCRLQ16602 461 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 IER5Q5VY09 327 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 MYOCDQ8IZQ8 938 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 METTL13Q8N6R0 699 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 TMEM40Q8WWA1 233 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 MTMR9Q96QG7 549 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 CELF4Q9BZC1 486 aaKnown RBP16.94■□□□□ 0.3
UBE3B-212ENST00000540230 SLC28A3Q9HAS3 691 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 NRBP2Q9NSY0 501 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 RGL1Q9NZL6 768 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 CEP131Q9UPN4 1083 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 STXBP5LQ9Y2K9 1186 aa16.94■□□□□ 0.3
UBE3B-212ENST00000540230 EFCAB14O75071 495 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 GJB5O95377 273 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 MCM2P49736 904 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 MTERF2Q49AM1 385 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 XKR3Q5GH77 459 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 PPP2R2DQ66LE6 453 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 PLA2G4FQ68DD2 849 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 TSHZ1Q6ZSZ6 1077 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 ANO5Q75V66 913 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 NOSTRINQ8IVI9 506 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 SLFN12Q8IYM2 578 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 LINC01599Q8WXQ3 324 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 GINS2Q9Y248 185 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 KDM3AQ9Y4C1 1321 aa16.93■□□□□ 0.3
UBE3B-212ENST00000540230 M0QZ92 97 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 TLL1O43897 1013 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
UBE3B-212ENST00000540230 RPLP2P05387 115 aaKnown RBP16.92■□□□□ 0.3
UBE3B-212ENST00000540230 TXKP42681 527 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 PSMC5P62195 406 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 CYP4A11Q02928 519 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 DRP2Q13474 957 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 EPHA7Q15375 998 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 ZNF174Q15697 407 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 KIZQ2M2Z5 673 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 TMEM266Q2M3C6 531 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 EFCAB12Q6NXP0 572 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 NME8Q8N427 588 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
UBE3B-212ENST00000540230 IL27Q8NEV9 243 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 APBB2Q92870 758 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 DYDC2Q96IM9 177 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 ZNF668Q96K58 619 aaPredicted RBP16.92■□□□□ 0.3
UBE3B-212ENST00000540230 LXNQ9BS40 222 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 NIFKQ9BYG3 293 aaKnown RBP16.92■□□□□ 0.3
UBE3B-212ENST00000540230 PRDM12Q9H4Q4 367 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 TTC12Q9H892 705 aaPredicted RBP16.92■□□□□ 0.3
UBE3B-212ENST00000540230 UNC80Q8N2C7 3258 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 ARID2Q68CP9 1835 aa16.92■□□□□ 0.3
UBE3B-212ENST00000540230 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 GPR32O75388 356 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 P4HBP07237 508 aaKnown RBP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 U2AF2P26368 475 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 QARSP47897 775 aaKnown RBP16.91■□□□□ 0.3
UBE3B-212ENST00000540230 NPEPPSP55786 919 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 TAP1Q03518 808 aa16.91■□□□□ 0.3
UBE3B-212ENST00000540230 CTTNQ14247 550 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms