RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	TMEM62	Q0P6H9	643 aa		19.97	■□□□□ 0.79
BBS1-223	ENST00000533644	NEK8	Q86SG6	692 aa		19.97	■□□□□ 0.79
BBS1-223	ENST00000533644	KIAA0319L	Q8IZA0	1049 aa		19.97	■□□□□ 0.79
BBS1-223	ENST00000533644	CELF4	Q9BZC1	486 aa	Known RBP	19.97	■□□□□ 0.79
BBS1-223	ENST00000533644	DDX25	Q9UHL0	483 aa	Known RBP	19.97	■□□□□ 0.79
BBS1-223	ENST00000533644	CEP131	Q9UPN4	1083 aa		19.97	■□□□□ 0.79
BBS1-223	ENST00000533644	COL4A4	P53420	1690 aa	Predicted RBP	19.97	■□□□□ 0.79
BBS1-223	ENST00000533644	RFXAP	O00287	272 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	CHMP2A	O43633	222 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	SLC37A4	O43826	429 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	OAT	P04181	439 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	GCFC2	P16383	781 aa	Known RBP	19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	ERVK-21	P61565	698 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	UGCG	Q16739	394 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	LETM2	Q2VYF4	491 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	PPP4R3A	Q6IN85	833 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	TNFRSF25	Q93038	417 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	KIF2C	Q99661	725 aa		19.96	■□□□□ 0.79
BBS1-223	ENST00000533644	JAK2	O60674	1132 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	CD52	P31358	61 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	PRKCE	Q02156	737 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	EARS2	Q5JPH6	523 aa	Known RBP	19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	PIK3AP1	Q6ZUJ8	805 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	LINC01599	Q8WXQ3	324 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	TGS1	Q96RS0	853 aa	Known RBP	19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	KCNMB3	Q9NPA1	279 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	LIMCH1	Q9UPQ0	1083 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	MTCH2	Q9Y6C9	303 aa		19.95	■□□□□ 0.78
BBS1-223	ENST00000533644	ENPP3	O14638	875 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	LPXN	O60711	386 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	KRT2	P35908	639 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	GRB10	Q13322	594 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	MIER3	Q7Z3K6	550 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	LINC01465	Q8N7H1	131 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	FAM20A	Q96MK3	541 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	NAP1L4	Q99733	375 aa	Known RBP	19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	VAV3	Q9UKW4	847 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	TTC28	Q96AY4	2481 aa		19.94	■□□□□ 0.78
BBS1-223	ENST00000533644	FAM205C	A6NFA0	338 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	MAGEB2	O15479	319 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	UPP2	O95045	317 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	PAK2	Q13177	524 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	NR5A1	Q13285	461 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	FAM43B	Q6ZT52	329 aa	Predicted RBP	19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	TRMT1L	Q7Z2T5	733 aa	Known RBP	19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	YME1L1	Q96TA2	773 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	FTHL17	Q9BXU8	183 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	RC3H2	Q9HBD1	1191 aa	Known RBP	19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	BRMS1	Q9HCU9	246 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	NRBP2	Q9NSY0	501 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	PADI3	Q9ULW8	664 aa		19.93	■□□□□ 0.78
BBS1-223	ENST00000533644	LOXHD1	Q8IVV2	1947 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	TTC3	P53804	2025 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	TBX3	O15119	743 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	GTPBP6	O43824	516 aa	Predicted RBP	19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	STBD1	O95210	358 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	MMP1	P03956	469 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	RBM25	P49756	843 aa	Known RBP	19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	PPP2R5C	Q13362	524 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	TARBP2	Q15633	366 aa	Known RBP	19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	TMEM40	Q8WWA1	233 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	PPM1E	Q8WY54	764 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	SUGCT	Q9HAC7	445 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	PRRC2B	Q5JSZ5	2229 aa	Known RBP	19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	EVPL	Q92817	2033 aa		19.92	■□□□□ 0.78
BBS1-223	ENST00000533644	CCNT1	O60563	726 aa	Known RBP	19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	CCDC85B	Q15834	202 aa	Predicted RBP	19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	RTN4RL1	Q86UN2	441 aa	Predicted RBP	19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	CRIPAK	Q8N1N5	446 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	METTL13	Q8N6R0	699 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	GDPD5	Q8WTR4	605 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	HAS1	Q92839	578 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	C17orf80	Q9BSJ5	609 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	NIFK	Q9BYG3	293 aa	Known RBP	19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	TSPYL2	Q9H2G4	693 aa	Predicted RBP	19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	TMX1	Q9H3N1	280 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	CDHR5	Q9HBB8	845 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	ERVK-5	Q9HDB9	667 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	PRDM6	Q9NQX0	595 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	MTUS1	Q9ULD2	1270 aa		19.91	■□□□□ 0.78
BBS1-223	ENST00000533644	REV3L	O60673	3130 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	EML1	O00423	815 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	GPR32	O75388	356 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	CLCN3	P51790	818 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	CRYBB1	P53674	252 aa	Predicted RBP	19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	TMEM266	Q2M3C6	531 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	XKR3	Q5GH77	459 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	KRT40	Q6A162	431 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	DIS3L2	Q8IYB7	885 aa	Known RBP	19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	SAMD11	Q96NU1	681 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	CEP89	Q96ST8	783 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	LLPH	Q9BRT6	129 aa	Known RBP	19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	LMCD1	Q9NZU5	365 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	GINS2	Q9Y248	185 aa		19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	NOC2L	Q9Y3T9	749 aa	Known RBP	19.9	■□□□□ 0.78
BBS1-223	ENST00000533644	BTBD18	B2RXH4	712 aa		19.89	■□□□□ 0.77
BBS1-223	ENST00000533644	VTN	P04004	478 aa		19.89	■□□□□ 0.77
BBS1-223	ENST00000533644	TRIM29	Q14134	588 aa		19.89	■□□□□ 0.77
BBS1-223	ENST00000533644	KIZ	Q2M2Z5	673 aa		19.89	■□□□□ 0.77
BBS1-223	ENST00000533644	EFCAB12	Q6NXP0	572 aa		19.89	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms