RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KDM3AQ9Y4C1 1321 aa34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 CCNT1O60563 726 aaKnown RBP34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 OATP04181 439 aa34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 RBM25P49756 843 aaKnown RBP34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 UGCGQ16739 394 aa34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 USP38Q8NB14 1042 aa34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 ARNTL2Q8WYA1 636 aa34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 TNFRSF25Q93038 417 aa34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 AGO3Q9H9G7 860 aaKnown RBP34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 NRBP2Q9NSY0 501 aa34.15■■■■□ 3.06
SSSCA1-207ENST00000533115 MMP1P03956 469 aa34.14■■■■□ 3.06
SSSCA1-207ENST00000533115 HTRA4P83105 476 aaPredicted RBP34.14■■■■□ 3.06
SSSCA1-207ENST00000533115 PRKCEQ02156 737 aa34.14■■■■□ 3.06
SSSCA1-207ENST00000533115 TRIM29Q14134 588 aa34.14■■■■□ 3.06
SSSCA1-207ENST00000533115 CCDC83Q8IWF9 413 aa34.14■■■■□ 3.06
SSSCA1-207ENST00000533115 FAM20AQ96MK3 541 aa34.14■■■■□ 3.06
SSSCA1-207ENST00000533115 KCNMB3Q9NPA1 279 aa34.14■■■■□ 3.06
SSSCA1-207ENST00000533115 CD52P31358 61 aa34.13■■■■□ 3.05
SSSCA1-207ENST00000533115 FOSBP53539 338 aa34.13■■■■□ 3.05
SSSCA1-207ENST00000533115 KRT40Q6A162 431 aa34.13■■■■□ 3.05
SSSCA1-207ENST00000533115 SPRED2Q7Z698 418 aa34.13■■■■□ 3.05
SSSCA1-207ENST00000533115 ZSCAN31Q96LW9 406 aaPredicted RBP34.13■■■■□ 3.05
SSSCA1-207ENST00000533115 FAM205CA6NFA0 338 aa34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 EPOPA6NHQ4 379 aa34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 RFXAPO00287 272 aa34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 UPP2O95045 317 aa34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 PHF6Q8IWS0 365 aaKnown RBP eCLIP34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 LLPHQ9BRT6 129 aaKnown RBP34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 EVPLQ92817 2033 aa34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 UNC80Q8N2C7 3258 aa34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 PRUNE2Q8WUY3 3088 aa34.12■■■■□ 3.05
SSSCA1-207ENST00000533115 LINC01553A4QN01 128 aa34.11■■■■□ 3.05
SSSCA1-207ENST00000533115 ENPP3O14638 875 aa34.11■■■■□ 3.05
SSSCA1-207ENST00000533115 MAGEB2O15479 319 aa34.11■■■■□ 3.05
SSSCA1-207ENST00000533115 METTL13Q8N6R0 699 aa34.11■■■■□ 3.05
SSSCA1-207ENST00000533115 TRANK1O15050 2925 aa34.11■■■■□ 3.05
SSSCA1-207ENST00000533115 BTBD18B2RXH4 712 aa34.1■■■■□ 3.05
SSSCA1-207ENST00000533115 TBX3O15119 743 aa34.1■■■■□ 3.05
SSSCA1-207ENST00000533115 DIS3L2Q8IYB7 885 aaKnown RBP34.1■■■■□ 3.05
SSSCA1-207ENST00000533115 SH2B1Q9NRF2 756 aaPredicted RBP34.1■■■■□ 3.05
SSSCA1-207ENST00000533115 PADI3Q9ULW8 664 aa34.1■■■■□ 3.05
SSSCA1-207ENST00000533115 LOXHD1Q8IVV2 1947 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 PAK2Q13177 524 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 PPP2R5CQ13362 524 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 SP7Q8TDD2 431 aaPredicted RBP34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 PPM1EQ8WY54 764 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 HAS1Q92839 578 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 TGS1Q96RS0 853 aaKnown RBP34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 YME1L1Q96TA2 773 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 FTHL17Q9BXU8 183 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 VAV3Q9UKW4 847 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 GINS2Q9Y248 185 aa34.09■■■■□ 3.05
SSSCA1-207ENST00000533115 ERVK-21P61565 698 aa34.08■■■■□ 3.05
SSSCA1-207ENST00000533115 POTEDQ86YR6 584 aa34.08■■■■□ 3.05
SSSCA1-207ENST00000533115 CDHR5Q9HBB8 845 aa34.08■■■■□ 3.05
SSSCA1-207ENST00000533115 A0A0C4DFX4 3053 aa34.08■■■■□ 3.05
SSSCA1-207ENST00000533115 MARCH6O60337 910 aa34.07■■■■□ 3.04
SSSCA1-207ENST00000533115 POU3F3P20264 500 aaPredicted RBP34.07■■■■□ 3.04
SSSCA1-207ENST00000533115 XKR3Q5GH77 459 aa34.07■■■■□ 3.04
SSSCA1-207ENST00000533115 EFCAB12Q6NXP0 572 aa34.07■■■■□ 3.04
SSSCA1-207ENST00000533115 LINC01465Q8N7H1 131 aa34.07■■■■□ 3.04
SSSCA1-207ENST00000533115 EML1O00423 815 aa34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 TMOD1P28289 359 aa34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 CLCN3P51790 818 aa34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 RABEP1Q15276 862 aa34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 CCDC85BQ15834 202 aaPredicted RBP34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 BANK1Q8NDB2 785 aa34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 LINC01599Q8WXQ3 324 aa34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 NIFKQ9BYG3 293 aaKnown RBP34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 MTUS1Q9ULD2 1270 aa34.06■■■■□ 3.04
SSSCA1-207ENST00000533115 GTPBP6O43824 516 aaPredicted RBP34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 STBD1O95210 358 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 VTNP04004 478 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 CRYBB1P53674 252 aaPredicted RBP34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 PSMC5P62195 406 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 TARBP2Q15633 366 aaKnown RBP34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 KIZQ2M2Z5 673 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 TMEM266Q2M3C6 531 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 RTN4RL1Q86UN2 441 aaPredicted RBP34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 TMEM40Q8WWA1 233 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 PPP1R16BQ96T49 567 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 UPF2Q9HAU5 1272 aaKnown RBP34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 SEPT9Q9UHD8 586 aaPredicted RBP34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 NOC2LQ9Y3T9 749 aaKnown RBP34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 MTCH2Q9Y6C9 303 aa34.05■■■■□ 3.04
SSSCA1-207ENST00000533115 GPR32O75388 356 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 RPS6KA5O75582 802 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 BAG4O95429 457 aaKnown RBP34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 HMGN5P82970 282 aaKnown RBP34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 GRB10Q13322 594 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 SAFBQ15424 915 aaKnown RBP eCLIP34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 SLFN12Q8IYM2 578 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 LRRC71Q8N4P6 559 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 C8orf76Q96K31 380 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 MAP7D2Q96T17 732 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 AKT3Q9Y243 479 aa34.04■■■■□ 3.04
SSSCA1-207ENST00000533115 GUCY1B3Q02153 619 aa34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 TBC1D8BQ0IIM8 1120 aa34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 NFX1Q12986 1120 aaKnown RBP34.03■■■■□ 3.04
SSSCA1-207ENST00000533115 FAM43BQ6ZT52 329 aaPredicted RBP34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms