RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 PCDHA2Q9Y5H9 948 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 TTC3P53804 2025 aa17.3■□□□□ 0.36
DEPDC7-204ENST00000532078 IGSF9BQ9UPX0 1349 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 SMIM35A0A1B0GVV1 85 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 BACH1O14867 736 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 ATG7O95352 703 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 SCG2P13521 617 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 BMPR1AP36894 532 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 BTG3Q14201 252 aaPredicted RBP17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 PFKFB3Q16875 520 aaPredicted RBP17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 PUS10Q3MIT2 529 aaKnown RBP17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 TCEAL5Q5H9L2 206 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 FAM160B1Q5W0V3 765 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 CLP1Q92989 425 aaKnown RBP17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 LMAN2LQ9H0V9 348 aa17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 AGO3Q9H9G7 860 aaKnown RBP17.29■□□□□ 0.36
DEPDC7-204ENST00000532078 NID2Q14112 1375 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 KDM3AQ9Y4C1 1321 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 ESYT2A0FGR8 921 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 CCNE2O96020 404 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 TMEM62Q0P6H9 643 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 PAK2Q13177 524 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 PTCRAQ6ISU1 281 aaPredicted RBP17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 PLA2G4DQ86XP0 818 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 NME8Q8N427 588 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 LINC01599Q8WXQ3 324 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 ZNF689Q96CS4 500 aaPredicted RBP17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 PABPC5Q96DU9 382 aaKnown RBP17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 ARIH1Q9Y4X5 557 aaPredicted RBP17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 COL1A2P08123 1366 aa17.28■□□□□ 0.36
DEPDC7-204ENST00000532078 IGKV6D-21A0A0A0MT36 114 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 DDX39AO00148 427 aaKnown RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 HBP1O60381 514 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 DGKIO75912 1065 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 CYP3A4P08684 503 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 LINC00271P0C7V0 271 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 ADD1P35611 737 aaKnown RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 KRT76Q01546 638 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 APOBRQ0VD83 1088 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 COL19A1Q14993 1142 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 MTHFD1LQ6UB35 978 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 ABHD15Q6UXT9 468 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 FAM43BQ6ZT52 329 aaPredicted RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 NPAS4Q8IUM7 802 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 NEK9Q8TD19 979 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 ATP8B4Q8TF62 1192 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 KCNB2Q92953 911 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 BRF1Q92994 677 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 PLVAPQ9BX97 442 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 CELF4Q9BZC1 486 aaKnown RBP17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 C6orf50Q9HD87 102 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 TCEAL9Q9UHQ7 104 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 PADI3Q9ULW8 664 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
DEPDC7-204ENST00000532078 ATG2AQ2TAZ0 1938 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 NCK2O43639 380 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 STAG3L1P0CL83 205 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 CPA1P15085 419 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 MIS18BP1Q6P0N0 1132 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 PDXDC2PQ6P474 469 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 Q6ZUG5 572 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 CCDC60Q8IWA6 550 aaPredicted RBP17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 CMTR2Q8IYT2 770 aaKnown RBP17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 CRYGNQ8WXF5 182 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 EPHX3Q9H6B9 360 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 ZNF302Q9NR11 478 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 RAPGEFL1Q9UHV5 662 aa17.26■□□□□ 0.35
DEPDC7-204ENST00000532078 LOXHD1Q8IVV2 1947 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 GRXCR2A6NFK2 248 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 H3BQ06 376 aaPredicted RBP17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 GRM6O15303 877 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 KLRC1P26715 233 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 GNA11P29992 359 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 AKAP17AQ02040 695 aaKnown RBP17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 ZNF484Q5JVG2 852 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 ZNF577Q9BSK1 485 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 TBC1D22BQ9NU19 505 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 CLDND1Q9NY35 253 aa17.25■□□□□ 0.35
DEPDC7-204ENST00000532078 KIAA1671Q9BY89 1806 aa17.24■□□□□ 0.35
DEPDC7-204ENST00000532078 DHX15O43143 795 aaKnown RBP17.24■□□□□ 0.35
DEPDC7-204ENST00000532078 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
DEPDC7-204ENST00000532078 MMP1P03956 469 aa17.24■□□□□ 0.35
DEPDC7-204ENST00000532078 IL9P15248 144 aa17.24■□□□□ 0.35
DEPDC7-204ENST00000532078 SSTR3P32745 418 aaPredicted RBP17.24■□□□□ 0.35
DEPDC7-204ENST00000532078 HSPA4P34932 840 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms