RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 LIG3P49916 1009 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 USP11P51784 963 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 ERVK-9P63128 1117 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 ZNF211Q13398 564 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-207ENST00000528288 DPY19L2P1Q6NXN4 242 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 AADACL2Q6P093 401 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 SLFN12Q8IYM2 578 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 RNF10Q8N5U6 811 aaKnown RBP8.15□□□□□ -1.11
C11orf54-207ENST00000528288 METTL13Q8N6R0 699 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 SYT2Q8N9I0 419 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-207ENST00000528288 PRMT6Q96LA8 375 aaPredicted RBP8.15□□□□□ -1.11
C11orf54-207ENST00000528288 AMACRQ9UHK6 382 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 ABCB11O95342 1321 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 MYH4Q9Y623 1939 aa8.15□□□□□ -1.11
C11orf54-207ENST00000528288 TMEM110-MUSTN1A8MSY1 372 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 PPFIA4O75335 1185 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 FAM13AO94988 1023 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 GNA14O95837 355 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 SEC24CP53992 1094 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 EPHA7Q15375 998 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 MIGA2Q7L4E1 593 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 DAAM2Q86T65 1068 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 PALB2Q86YC2 1186 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 PIK3R5Q8WYR1 880 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 IQCDQ96DY2 449 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 RNPC3Q96LT9 517 aaKnown RBP8.14□□□□□ -1.11
C11orf54-207ENST00000528288 TMX4Q9H1E5 349 aaPredicted RBP8.14□□□□□ -1.11
C11orf54-207ENST00000528288 FBXO28Q9NVF7 368 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 TAS2R14Q9NYV8 317 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 AIPL1Q9NZN9 384 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 ARFGEF1Q9Y6D6 1849 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 TMEM150BA6NC51 233 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 DDX3XO00571 662 aaKnown RBP eCLIP8.14□□□□□ -1.119e-8■■■□□ 15.2
C11orf54-207ENST00000528288 TGFB1I1O43294 461 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 ECE2O60344 883 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 BMP3P12645 472 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 RPA1P27694 616 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 CEP85LQ5SZL2 805 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 RINT1Q6NUQ1 792 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 HHIPL2Q6UWX4 724 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 USP38Q8NB14 1042 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 ZSWIM2Q8NEG5 633 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 ERMNQ8TAM6 284 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 SLC35C1Q96A29 364 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 CSRNP1Q96S65 589 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 SIX2Q9NPC8 291 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 PRR12Q9ULL5 1215 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 KIF4AO95239 1232 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 EPB41P11171 864 aaKnown RBP8.14□□□□□ -1.11
C11orf54-207ENST00000528288 CBWD6Q4V339 395 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 CBWD3Q5JTY5 395 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 CBWD5Q5RIA9 395 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 PEX26Q7Z412 305 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 TAF1LQ8IZX4 1826 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 FAM84AQ96KN4 292 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 CCDC17Q96LX7 622 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 ACP6Q9NPH0 428 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
C11orf54-207ENST00000528288 GDF3Q9NR23 364 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 VAV3Q9UKW4 847 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 IGSF9BQ9UPX0 1349 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 PLAAQ9Y263 795 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 PCDHGC5Q9Y5F6 944 aa8.14□□□□□ -1.11
C11orf54-207ENST00000528288 CALUO43852 315 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 ARP10275 920 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 PPFIA1Q13136 1202 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 DGKZQ13574 1117 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 ZNF746Q6NUN9 644 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 GBP6Q6ZN66 633 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 ZNF572Q7Z3I7 529 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 TRIM51Q9BSJ1 452 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 GRIN2DO15399 1336 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 KRIT1O00522 736 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 DAPK3O43293 454 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 OPA1O60313 960 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 EVI5O60447 810 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 USP8P40818 1118 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 GALCP54803 685 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 PAK2Q13177 524 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 LRCH2Q5VUJ6 765 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 CHADLQ6NUI6 762 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 EMBQ6PCB8 327 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 PACS2Q86VP3 889 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 FAM186BQ8IYM0 893 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 MICALL1Q8N3F8 863 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 TPCN2Q8NHX9 752 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 LNX1Q8TBB1 728 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 DCAF4Q8WV16 495 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 HOOK2Q96ED9 719 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 EDEM3Q9BZQ6 932 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 NYAP2Q9P242 653 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 NOC2LQ9Y3T9 749 aaKnown RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 CYP3A7-CYP3A51PA0A087WV96 503 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 FRMD3A2A2Y4 597 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 TTI1O43156 1089 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 SART1O43290 800 aaKnown RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 SLITRK3O94933 977 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 CYP3A7P24462 503 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 EDRF1Q3B7T1 1238 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms