RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 KCNA1Q09470 495 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 USH1GQ495M9 461 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 TTC31Q49AM3 519 aaPredicted RBP12.74□□□□□ -0.37
LINC01001-201ENST00000526704 TCERG1LQ5VWI1 586 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 GJB7Q6PEY0 223 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 OLIG1Q8TAK6 271 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 RNPC3Q96LT9 517 aaKnown RBP12.74□□□□□ -0.37
LINC01001-201ENST00000526704 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 POLD4Q9HCU8 107 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 NOC2LQ9Y3T9 749 aaKnown RBP12.74□□□□□ -0.37
LINC01001-201ENST00000526704 FAM169AQ9Y6X4 670 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 CEP104O60308 925 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 FLOT1O75955 427 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 ANXA13P27216 316 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 IFI16Q16666 785 aaKnown RBP12.74□□□□□ -0.37
LINC01001-201ENST00000526704 CERKLQ49MI3 558 aaPredicted RBP12.74□□□□□ -0.37
LINC01001-201ENST00000526704 TADA2BQ86TJ2 420 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 BHMT2Q9H2M3 363 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 STXBP5LQ9Y2K9 1186 aa12.74□□□□□ -0.37
LINC01001-201ENST00000526704 A0A087WUV0 522 aaPredicted RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 PGRMC1O00264 195 aaKnown RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 OPLAHO14841 1288 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 CLIC2O15247 247 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 GCNT3O95395 438 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 POLD1P28340 1107 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 MMP14P50281 582 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 ICA1Q05084 483 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 TCP10Q12799 353 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 EMC10Q5UCC4 262 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 SH3BP5LQ7L8J4 393 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 SLFN11Q7Z7L1 901 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 METTL13Q8N6R0 699 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 FAM20AQ96MK3 541 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 METTL14Q9HCE5 456 aaKnown RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 PLAAQ9Y263 795 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 A6NNZ2 444 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 EML1O00423 815 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 DDX3XO00571 662 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 NR1D1P20393 614 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 CIITAP33076 1130 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 TUBB8Q3ZCM7 444 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 MCTP2Q6DN12 878 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 C1orf131Q8NDD1 294 aaKnown RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 EIF2AK1Q9BQI3 630 aaKnown RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
LINC01001-201ENST00000526704 AP1M1Q9BXS5 423 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 NEUROG2Q9H2A3 272 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 IKZF4Q9H2S9 585 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 SAMM50Q9Y512 469 aa12.73□□□□□ -0.37
LINC01001-201ENST00000526704 A0A0A6YYK5 440 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 TGFB1I1O43294 461 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 EYA4O95677 639 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 GUCY1A3Q02108 690 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 CUL1Q13616 776 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 UAP1Q16222 522 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 LNX1Q8TBB1 728 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 ZDHHC15Q96MV8 337 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 OLFML3Q9NRN5 406 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 GTPBP10A4D1E9 387 aaKnown RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 F5H6K3 240 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 ZEB2O60315 1214 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 TOM1O60784 492 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 GDF11O95390 407 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 NDUFB10O96000 172 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 FOSP01100 380 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 H2AFZP0C0S5 128 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 HOXA13P31271 388 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 LSP1P33241 339 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 HSD17B3P37058 310 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 KLRC3Q07444 240 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 HLTFQ14527 1009 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 SYDE2Q5VT97 1194 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 TATDN1Q6P1N9 297 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 H2AFVQ71UI9 128 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 MAATS1Q7Z4T9 603 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 RASGEF1CQ8N431 466 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 GMCL1P1Q8NEA9 526 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 DDX47Q9H0S4 455 aaKnown RBP12.72□□□□□ -0.37
LINC01001-201ENST00000526704 YY1AP1Q9H869 796 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 KCNQ5Q9NR82 932 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
LINC01001-201ENST00000526704 HMGB1P1B2RPK0 211 aaPredicted RBP12.71□□□□□ -0.37
LINC01001-201ENST00000526704 H0YGN5 161 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms