RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 LMCD1Q9NZU5 365 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 GABBR1Q9UBS5 961 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 PADI3Q9ULW8 664 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
VEGFA-223ENST00000523125 STK36Q9NRP7 1315 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 ZNF862O60290 1169 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 PSMD10O75832 226 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 TDP2O95551 362 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 C22orf31O95567 290 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 LINC00271P0C7V0 271 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 MRPS5P82675 430 aaKnown RBP14□□□□□ -0.17
VEGFA-223ENST00000523125 EPC2Q52LR7 807 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 B3GNT9Q6UX72 402 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 C22orf23Q9BZE7 217 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 UNC45AQ9H3U1 944 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 RC3H2Q9HBD1 1191 aaKnown RBP14□□□□□ -0.17
VEGFA-223ENST00000523125 DISC1Q9NRI5 854 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 SAMM50Q9Y512 469 aa14□□□□□ -0.17
VEGFA-223ENST00000523125 WDR64B1ANS9 1081 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 M0QZ92 97 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 GAS7O60861 476 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 CDKL5O76039 1030 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 LARGE1O95461 756 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 FDPSP14324 419 aaKnown RBP13.99□□□□□ -0.17
VEGFA-223ENST00000523125 TFF2Q03403 129 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 UGCGQ16739 394 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 ME3Q16798 604 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
VEGFA-223ENST00000523125 CKAP2LQ8IYA6 745 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 FBXO22Q8NEZ5 403 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 ETNPPLQ8TBG4 499 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 TMEM40Q8WWA1 233 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 SYMPKQ92797 1274 aaKnown RBP13.99□□□□□ -0.17
VEGFA-223ENST00000523125 ZNF689Q96CS4 500 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-223ENST00000523125 TMX1Q9H3N1 280 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 MYO7AQ13402 2215 aa13.99□□□□□ -0.17
VEGFA-223ENST00000523125 SFNP31947 248 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 NONOQ15233 471 aaKnown RBP eCLIP13.98□□□□□ -0.173e-6■■■□□ 16.3
VEGFA-223ENST00000523125 ANKRD1Q15327 319 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 INF2Q27J81 1249 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 TMEM266Q2M3C6 531 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 MOXD1Q6UVY6 613 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 KRT25Q7Z3Z0 450 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 TMEM192Q8IY95 271 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 LINC01465Q8N7H1 131 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 SAMD11Q96NU1 681 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 TEKT3Q9BXF9 490 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-223ENST00000523125 TCEAL9Q9UHQ7 104 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 NOC2LQ9Y3T9 749 aaKnown RBP13.98□□□□□ -0.17
VEGFA-223ENST00000523125 BDP1A6H8Y1 2624 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 NCOR1O75376 2440 aa13.98□□□□□ -0.17
VEGFA-223ENST00000523125 PLXNA4Q9HCM2 1894 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 ARID2Q68CP9 1835 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 H3BNC9 293 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 CHMP2AO43633 222 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 SLC37A4O43826 429 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 MGEA5O60502 916 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 GPR32O75388 356 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 DGKIO75912 1065 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 STBD1O95210 358 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 VTNP04004 478 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 OATP04181 439 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-223ENST00000523125 BMP1P13497 986 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 JAK3P52333 1124 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 PRKCEQ02156 737 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 PAK2Q13177 524 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 SKIV2LQ15477 1246 aaKnown RBP13.97□□□□□ -0.17
VEGFA-223ENST00000523125 GTF3C6Q969F1 213 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 FAM167AQ96KS9 214 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 ERVK-5Q9HDB9 667 aa13.97□□□□□ -0.17
VEGFA-223ENST00000523125 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-223ENST00000523125 ADGRA3Q8IWK6 1321 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 KCNQ1P51787 676 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 CLCN3P51790 818 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 NEK4P51957 841 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 CRYBB1P53674 252 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-223ENST00000523125 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.17
VEGFA-223ENST00000523125 KIZQ2M2Z5 673 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 EARS2Q5JPH6 523 aaKnown RBP13.96□□□□□ -0.17
VEGFA-223ENST00000523125 FIBCD1Q8N539 461 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 RDM1Q8NG50 284 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 CLP1Q92989 425 aaKnown RBP13.96□□□□□ -0.17
VEGFA-223ENST00000523125 MRPL38Q96DV4 380 aaKnown RBP13.96□□□□□ -0.17
VEGFA-223ENST00000523125 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 PPP1R16BQ96T49 567 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 DDX25Q9UHL0 483 aaKnown RBP13.96□□□□□ -0.17
VEGFA-223ENST00000523125 COG5Q9UP83 839 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 CEP131Q9UPN4 1083 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 GINS2Q9Y248 185 aa13.96□□□□□ -0.17
VEGFA-223ENST00000523125 C5orf42Q9H799 3197 aa13.95□□□□□ -0.18
VEGFA-223ENST00000523125 CCDC194A0A1B0GVG4 234 aa13.95□□□□□ -0.18
VEGFA-223ENST00000523125 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
VEGFA-223ENST00000523125 C5orf67F2Z3F1 127 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms