RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 H3BQ06 376 aaPredicted RBP22.28■■□□□ 1.16
PABPC1-215ENST00000520804 STAG3L1P0CL83 205 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 IL9P15248 144 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 IFNAR1P17181 557 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 PDIA3P30101 505 aaKnown RBP22.28■■□□□ 1.16
PABPC1-215ENST00000520804 TMEM266Q2M3C6 531 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 PRR16Q569H4 304 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 FAM43BQ6ZT52 329 aaPredicted RBP22.28■■□□□ 1.16
PABPC1-215ENST00000520804 FAM178BQ8IXR5 827 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 CKAP2LQ8IYA6 745 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 CCDC148Q8NFR7 591 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 BBXQ8WY36 941 aaPredicted RBP22.28■■□□□ 1.16
PABPC1-215ENST00000520804 KHSRPQ92945 711 aaKnown RBP eCLIP22.28■■□□□ 1.16
PABPC1-215ENST00000520804 SLC26A6Q9BXS9 759 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 ERVK-5Q9HDB9 667 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 GINS2Q9Y248 185 aa22.28■■□□□ 1.16
PABPC1-215ENST00000520804 PPFIA3O75145 1194 aa22.27■■□□□ 1.16
PABPC1-215ENST00000520804 CCT2P78371 535 aaKnown RBP22.27■■□□□ 1.16
PABPC1-215ENST00000520804 NFX1Q12986 1120 aaKnown RBP22.27■■□□□ 1.16
PABPC1-215ENST00000520804 LENG9Q96B70 501 aa22.27■■□□□ 1.16
PABPC1-215ENST00000520804 CDHR5Q9HBB8 845 aa22.27■■□□□ 1.16
PABPC1-215ENST00000520804 VPS54Q9P1Q0 977 aa22.27■■□□□ 1.16
PABPC1-215ENST00000520804 TCEAL9Q9UHQ7 104 aa22.27■■□□□ 1.16
PABPC1-215ENST00000520804 RAPGEFL1Q9UHV5 662 aa22.27■■□□□ 1.16
PABPC1-215ENST00000520804 NOC2LQ9Y3T9 749 aaKnown RBP22.27■■□□□ 1.16
PABPC1-215ENST00000520804 PCDHA10Q9Y5I2 948 aa22.27■■□□□ 1.16
PABPC1-215ENST00000520804 NCK2O43639 380 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 RPS6KA5O75582 802 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 C22orf31O95567 290 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 MMP1P03956 469 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 PSAPP07602 524 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 TMEM40Q8WWA1 233 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 P2RX5Q93086 422 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 NCOA5Q9HCD5 579 aaKnown RBP22.26■■□□□ 1.15
PABPC1-215ENST00000520804 CLDND1Q9NY35 253 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 GABBR1Q9UBS5 961 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 PLAGL2Q9UPG8 496 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 KIAA1671Q9BY89 1806 aa22.26■■□□□ 1.15
PABPC1-215ENST00000520804 MYH9P35579 1960 aaKnown RBP22.25■■□□□ 1.15
PABPC1-215ENST00000520804 EPB41L2O43491 1005 aaKnown RBP22.25■■□□□ 1.15
PABPC1-215ENST00000520804 EDIL3O43854 480 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 MGEA5O60502 916 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 SARSP49591 514 aaKnown RBP22.25■■□□□ 1.15
PABPC1-215ENST00000520804 PAN2Q504Q3 1202 aaKnown RBP22.25■■□□□ 1.15
PABPC1-215ENST00000520804 NAALADL2Q58DX5 795 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 ODR4Q5SWX8 454 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 EP400NLQ6ZTU2 488 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 RUFY3Q7L099 469 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 GJD3Q8N144 294 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 ZSWIM6Q9HCJ5 1215 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 ALG13Q9NP73 1137 aaKnown RBP22.25■■□□□ 1.15
PABPC1-215ENST00000520804 SH3GLB2Q9NR46 395 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 LRFN2Q9ULH4 789 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 CEP131Q9UPN4 1083 aa22.25■■□□□ 1.15
PABPC1-215ENST00000520804 EVPLQ92817 2033 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 LTBRP36941 435 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 CRYBB1P53674 252 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-215ENST00000520804 HYAL1Q12794 435 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 CAMK1Q14012 370 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 TOB2Q14106 344 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-215ENST00000520804 CTC1Q2NKJ3 1217 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 TRMT1LQ7Z2T5 733 aaKnown RBP22.24■■□□□ 1.15
PABPC1-215ENST00000520804 RGS18Q9NS28 235 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 ST3GAL5Q9UNP4 418 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 SAMM50Q9Y512 469 aa22.24■■□□□ 1.15
PABPC1-215ENST00000520804 WDR64B1ANS9 1081 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 PI4K2BG5E9Z4 385 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 GPR182O15218 404 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 GATMP50440 423 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 USP11P51784 963 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 NLRP5P59047 1200 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 KIZQ2M2Z5 673 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 METTL13Q8N6R0 699 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 FAM167AQ96KS9 214 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 OSMRQ99650 979 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 ADAM2Q99965 735 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 LRFN3Q9BTN0 628 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 C1orf112Q9NSG2 853 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 PCDHB7Q9Y5E2 793 aa22.23■■□□□ 1.15
PABPC1-215ENST00000520804 MYO7AQ13402 2215 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 DENND3A2RUS2 1198 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 MSH4O15457 936 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 MAGEB2O15479 319 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 GPR32O75388 356 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 VTNP04004 478 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 ITGB1P05556 798 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 SLC24A5Q71RS6 500 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 TRIM22Q8IYM9 498 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 KLHL23Q8NBE8 558 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 SPPL3Q8TCT6 385 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 PPP1R16BQ96T49 567 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 RNF216Q9NWF9 866 aaPredicted RBP22.22■■□□□ 1.15
PABPC1-215ENST00000520804 FAM50BQ9Y247 325 aa22.22■■□□□ 1.15
PABPC1-215ENST00000520804 WDR81Q562E7 1941 aa22.21■■□□□ 1.15
PABPC1-215ENST00000520804 C9IYK1 514 aa22.21■■□□□ 1.15
PABPC1-215ENST00000520804 CSPG5O95196 566 aa22.21■■□□□ 1.15
PABPC1-215ENST00000520804 IBSPP21815 317 aaPredicted RBP22.21■■□□□ 1.15
PABPC1-215ENST00000520804 DNAJB1P25685 340 aa22.21■■□□□ 1.15
PABPC1-215ENST00000520804 SSTR3P32745 418 aaPredicted RBP22.21■■□□□ 1.15
PABPC1-215ENST00000520804 SSRP1Q08945 709 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms