RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-209	ENST00000519141	SEMA6B	Q9H3T3	888 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	THAP9	Q9H5L6	903 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	MLXIP	Q9HAP2	919 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	PARVG	Q9HBI0	331 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	VTA1	Q9NP79	307 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	OLFML3	Q9NRN5	406 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	SLC5A4	Q9NY91	659 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	SEL1L	Q9UBV2	794 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	DDX41	Q9UJV9	622 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	DIS3	Q9Y2L1	958 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	TELO2	Q9Y4R8	837 aa		13.71	□□□□□ -0.21
SPIDR-209	ENST00000519141	ZNF862	O60290	1169 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	USO1	O60763	962 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	ATG7	O95352	703 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	TBC1D8	O95759	1140 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	ZNF131	P52739	623 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	TTLL4	Q14679	1199 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	LY6K	Q17RY6	165 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	PLA2G4F	Q68DD2	849 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	ANKRD40	Q6AI12	368 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	FOXR2	Q6PJQ5	311 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	FAM114A1	Q8IWE2	563 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	MYCT1	Q8N699	235 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	DUSP9	Q99956	384 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	TIPIN	Q9BVW5	301 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	MRPL44	Q9H9J2	332 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	ZNF302	Q9NR11	478 aa		13.7	□□□□□ -0.22
SPIDR-209	ENST00000519141	TMEM150B	A6NC51	233 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	KCNJ18	B7U540	433 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	HIP1R	O75146	1068 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	ARIH2	O95376	493 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	TXN	P10599	105 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	KCNJ12	Q14500	433 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	XKR3	Q5GH77	459 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	CELF3	Q5SZQ8	465 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	FAM160B1	Q5W0V3	765 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	CCDC62	Q6P9F0	684 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	C17orf99	Q6UX52	265 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	ANO5	Q75V66	913 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	ABHD8	Q96I13	439 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	MAML3	Q96JK9	1138 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	SRRT	Q9BXP5	876 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	CFHR5	Q9BXR6	569 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	FGFBP2	Q9BYJ0	223 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	GSTTP1	A0A1W2PQM5	241 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	SFI1	A8K8P3	1242 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	NOP56	O00567	594 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	GCNT3	O95395	438 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	FGFR1OP	O95684	399 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	EEF1G	P26641	437 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	FILIP1L	Q4L180	1135 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	TCP11X2	Q5H9J9	407 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	ODR4	Q5SWX8	454 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	MAMDC4	Q6UXC1	1216 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	STXBP4	Q6ZWJ1	553 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	NELFCD	Q8IXH7	590 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	DHX37	Q8IY37	1157 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	SCFD1	Q8WVM8	642 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	SEPT1	Q8WYJ6	367 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	DRC1	Q96MC2	740 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	POLD4	Q9HCU8	107 aa		13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	LIMA1	Q9UHB6	759 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-209	ENST00000519141	DOCK3	Q8IZD9	2030 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	MKI67	P46013	3256 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	IGKV6D-21	A0A0A0MT36	114 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141		A0A1B0GTH6	734 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	EIF3D	O15371	548 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	STBD1	O95210	358 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	OAT	P04181	439 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	TCF7	P36402	384 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	CASP5	P51878	434 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	NPEPPS	P55786	919 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	MAP2K5	Q13163	448 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	MAPK7	Q13164	816 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	CRHR2	Q13324	411 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	KRT31	Q15323	416 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	APTX	Q7Z2E3	356 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	TMC6	Q7Z403	805 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	FAM178B	Q8IXR5	827 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	CEP170P1	Q96L14	293 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	SH2D3A	Q9BRG2	576 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	MCOLN1	Q9GZU1	580 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	PDGFC	Q9NRA1	345 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	LARS	Q9P2J5	1176 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	MGAM	O43451	1857 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	UBE4B	O95155	1302 aa		13.68	□□□□□ -0.22
SPIDR-209	ENST00000519141	ALDH1A1	P00352	501 aa		13.67	□□□□□ -0.22
SPIDR-209	ENST00000519141	MYB	P10242	640 aa		13.67	□□□□□ -0.22
SPIDR-209	ENST00000519141	BMT2	Q1RMZ1	405 aa		13.67	□□□□□ -0.22
SPIDR-209	ENST00000519141	ZCWPW2	Q504Y3	356 aa		13.67	□□□□□ -0.22
SPIDR-209	ENST00000519141	MORN1	Q5T089	497 aa		13.67	□□□□□ -0.22
SPIDR-209	ENST00000519141	PPP4R3CP	Q6ZMV5	832 aa		13.67	□□□□□ -0.22
SPIDR-209	ENST00000519141	MAEA	Q7L5Y9	396 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms