RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SESN3P58005 492 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 ALDH6A1Q02252 535 aaKnown RBP5.14□□□□□ -1.59
VPS13B-207ENST00000518569 STILQ15468 1287 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 PRAMEF18Q5VWM3 479 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 ESRP1Q6NXG1 681 aaKnown RBP5.14□□□□□ -1.59
VPS13B-207ENST00000518569 TTLL7Q6ZT98 887 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 NECAB2Q7Z6G3 386 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 SPATS2Q86XZ4 545 aaKnown RBP5.14□□□□□ -1.59
VPS13B-207ENST00000518569 C1QL4Q86Z23 238 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 CILP2Q8IUL8 1156 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 PHYKPLQ8IUZ5 450 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 SLC5A5Q92911 643 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 MAML3Q96JK9 1138 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 AMNQ9BXJ7 453 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 UCKL1Q9NWZ5 548 aa5.14□□□□□ -1.59
VPS13B-207ENST00000518569 UBA6A0AVT1 1052 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-207ENST00000518569 FBXO21O94952 628 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 CDK11BP21127 795 aaKnown RBP5.13□□□□□ -1.59
VPS13B-207ENST00000518569 MC4RP32245 332 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 ECE1P42892 770 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 ROM1Q03395 351 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 SMAD4Q13485 552 aaKnown RBP5.13□□□□□ -1.59
VPS13B-207ENST00000518569 RTP5Q14D33 572 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 DDB1Q16531 1140 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 TTC38Q5R3I4 469 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 BROXQ5VW32 411 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 TCERG1LQ5VWI1 586 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 CIAPIN1Q6FI81 312 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 LILRA6Q6PI73 481 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 STK32CQ86UX6 486 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 RASSF3Q86WH2 238 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 LINC01356Q8N9X3 169 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 NTMQ9P121 344 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 ZFP69BQ9UJL9 534 aa5.13□□□□□ -1.59
VPS13B-207ENST00000518569 hCG_2014768A0A024R1R8 64 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 ALG1L2C9J202 215 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 FFAR3O14843 346 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 NUAK1O60285 661 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 KNG1P01042 644 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 PRLP01236 227 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 COL6A1P12109 1028 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 ZNF28P17035 718 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 IL13P35225 146 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 IGBP1P78318 339 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 FRMD7Q6ZUT3 714 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 SIAH1Q8IUQ4 282 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 PRPF38AQ8NAV1 312 aaKnown RBP5.12□□□□□ -1.59
VPS13B-207ENST00000518569 ZSWIM3Q96MP5 696 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 ZDHHC5Q9C0B5 715 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 PUS7LQ9H0K6 701 aaKnown RBP5.12□□□□□ -1.59
VPS13B-207ENST00000518569 OR10A5Q9H207 317 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 CROTQ9UKG9 612 aa5.12□□□□□ -1.59
VPS13B-207ENST00000518569 K7ESF4 209 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 RAB11FIP3O75154 756 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 APEX1P27695 318 aaKnown RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 GLRBP48167 497 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 SARSP49591 514 aaKnown RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 MLLT6P55198 1093 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 ANAPC15P60006 121 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 IL13RA1P78552 427 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 TMPRSS15P98073 1019 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 RGL3Q3MIN7 710 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 KANK2Q63ZY3 851 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 IQSEC1Q6DN90 963 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 TIGD7Q6NT04 549 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 LHFPL2Q6ZUX7 228 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 KANSL1Q7Z3B3 1105 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 STPG3Q8N7X2 389 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 C7orf31Q8N865 590 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 CLRN3Q8NCR9 226 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 WDR48Q8TAF3 677 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 ZNF526Q8TF50 670 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 RTF1Q92541 710 aaKnown RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 ERCC4Q92889 916 aaPredicted RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 TUBGCP5Q96RT8 1024 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 TACO1Q9BSH4 297 aaKnown RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 FBXO10Q9UK96 956 aa5.11□□□□□ -1.59
VPS13B-207ENST00000518569 NOC2LQ9Y3T9 749 aaKnown RBP5.11□□□□□ -1.59
VPS13B-207ENST00000518569 H0Y858 1186 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 MAFGO15525 162 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 CDKN1CP49918 316 aaPredicted RBP5.1□□□□□ -1.59
VPS13B-207ENST00000518569 SLC6A3Q01959 620 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 NFATC3Q12968 1075 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 FAM26FQ5R3K3 315 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 SLFN12LQ6IEE8 588 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 TRMT10BQ6PF06 316 aaKnown RBP5.1□□□□□ -1.59
VPS13B-207ENST00000518569 LRSAM1Q6UWE0 723 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 ESPNLQ6ZVH7 1005 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 HDGFL2Q7Z4V5 671 aaPredicted RBP5.1□□□□□ -1.59
VPS13B-207ENST00000518569 CARFQ8N187 725 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 TP53I13Q8NBR0 393 aaPredicted RBP5.1□□□□□ -1.59
VPS13B-207ENST00000518569 ZCCHC14Q8WYQ9 949 aaKnown RBP5.1□□□□□ -1.59
VPS13B-207ENST00000518569 ZNF496Q96IT1 587 aaPredicted RBP5.1□□□□□ -1.59
VPS13B-207ENST00000518569 YTHDC1Q96MU7 727 aaKnown RBP5.1□□□□□ -1.59
VPS13B-207ENST00000518569 MENTQ9BUN1 341 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 IRF2BPLQ9H1B7 796 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 WNT8AQ9H1J5 351 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 SLC5A4Q9NY91 659 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 KCNG1Q9UIX4 513 aa5.1□□□□□ -1.59
VPS13B-207ENST00000518569 C9orf118A6NHY6 69 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms