RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ZNF569Q5MCW4 686 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 CACNA2D4Q7Z3S7 1137 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 DAW1Q8N136 415 aa29.2■■■□□ 2.26
COL13A1-210ENST00000517713 INPP4AQ96PE3 977 aaPredicted RBP29.2■■■□□ 2.26
COL13A1-210ENST00000517713 EIF3CLB5ME19 914 aaKnown RBP29.19■■■□□ 2.26
COL13A1-210ENST00000517713 HERVK_113P62684 666 aa29.19■■■□□ 2.26
COL13A1-210ENST00000517713 NFIL3Q16649 462 aa29.19■■■□□ 2.26
COL13A1-210ENST00000517713 C9orf131Q5VYM1 1079 aa29.19■■■□□ 2.26
COL13A1-210ENST00000517713 C4orf19Q8IY42 314 aa29.19■■■□□ 2.26
COL13A1-210ENST00000517713 EIF3CQ99613 913 aaKnown RBP29.19■■■□□ 2.26
COL13A1-210ENST00000517713 LSM14BQ9BX40 385 aaKnown RBP29.19■■■□□ 2.26
COL13A1-210ENST00000517713 METTL14Q9HCE5 456 aaKnown RBP29.19■■■□□ 2.26
COL13A1-210ENST00000517713 PCDHB13Q9Y5F0 798 aa29.19■■■□□ 2.26
COL13A1-210ENST00000517713 PAPPA2Q9BXP8 1791 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 LRRC53A6NM62 1247 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 EPB41P11171 864 aaKnown RBP29.18■■■□□ 2.26
COL13A1-210ENST00000517713 YBX3P16989 372 aaKnown RBP eCLIP29.18■■■□□ 2.26
COL13A1-210ENST00000517713 YWHABP31946 246 aaKnown RBP29.18■■■□□ 2.26
COL13A1-210ENST00000517713 PSMC5P62195 406 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 UGCGQ16739 394 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 TREML2Q5T2D2 321 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 CNKSR2Q8WXI2 1034 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 CEP72Q9P209 647 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 PDXDC1Q6P996 788 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 MYO1AQ9UBC5 1043 aa29.18■■■□□ 2.26
COL13A1-210ENST00000517713 NOL4O94818 638 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 IREB2P48200 963 aaKnown RBP29.17■■■□□ 2.26
COL13A1-210ENST00000517713 ZNF746Q6NUN9 644 aaPredicted RBP29.17■■■□□ 2.26
COL13A1-210ENST00000517713 KSR1Q8IVT5 923 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 RDM1Q8NG50 284 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 CCDC42Q96M95 316 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 CRACR2AQ9BSW2 395 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 HAUS4Q9H6D7 363 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 MYH11P35749 1972 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 OTOFQ9HC10 1997 aa29.17■■■□□ 2.26
COL13A1-210ENST00000517713 IPO7O95373 1038 aaKnown RBP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 XRCC5P13010 732 aaKnown RBP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 MAEAQ7L5Y9 396 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 CCDC43Q96MW1 224 aaKnown RBP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 SENP7Q9BQF6 1050 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 PTPRFP10586 1907 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 AFPP02771 609 aaKnown RBP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 CASP4P49662 377 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 ZNF662Q6ZS27 426 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 CHST13Q8NET6 341 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 STRA6Q9BX79 667 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 MOV10L1Q9BXT6 1211 aaKnown RBP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 IKZF4Q9H2S9 585 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 ARHGAP20Q9P2F6 1191 aa29.16■■■□□ 2.26
COL13A1-210ENST00000517713 LARSQ9P2J5 1176 aaKnown RBP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 V9GYY5 206 aaPredicted RBP29.16■■■□□ 2.26
COL13A1-210ENST00000517713 PLEKP08567 350 aaPredicted RBP29.15■■■□□ 2.26
COL13A1-210ENST00000517713 MTERF4Q7Z6M4 381 aaKnown RBP29.15■■■□□ 2.26
COL13A1-210ENST00000517713 SLC35F6Q8N357 371 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 NUCKS1Q9H1E3 243 aaKnown RBP29.15■■■□□ 2.26
COL13A1-210ENST00000517713 MRFAP1Q9Y605 127 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 USO1O60763 962 aaKnown RBP29.15■■■□□ 2.26
COL13A1-210ENST00000517713 STAM2O75886 525 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 RGS20O76081 388 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 LBX2Q6XYB7 198 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 HS2ST1Q7LGA3 356 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 KIAA1328Q86T90 577 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 LRRN4CLQ8ND94 238 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 NLRC4Q9NPP4 1024 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 PCDHA10Q9Y5I2 948 aa29.15■■■□□ 2.26
COL13A1-210ENST00000517713 LOC285556D6RIA3 1793 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 PPP1R37O75864 691 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 KCNA2P16389 499 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 CDHR1Q96JP9 859 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 TIPINQ9BVW5 301 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 GBP3Q9H0R5 595 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 ANKEF1Q9NU02 776 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 GUCA1BQ9UMX6 200 aa29.14■■■□□ 2.26
COL13A1-210ENST00000517713 MAPTP10636 758 aaKnown RBP29.13■■■□□ 2.25
COL13A1-210ENST00000517713 PSMC2P35998 433 aaKnown RBP29.13■■■□□ 2.25
COL13A1-210ENST00000517713 POLR2FP61218 127 aaKnown RBP29.13■■■□□ 2.25
COL13A1-210ENST00000517713 DCAF17Q5H9S7 520 aaPredicted RBP29.13■■■□□ 2.25
COL13A1-210ENST00000517713 MNS1Q8NEH6 495 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 MAP7D2Q96T17 732 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 ELP3Q9H9T3 547 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 TRIM10Q9UDY6 481 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 TMEM150BA6NC51 233 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 K7ENM7 598 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 BACH1O14867 736 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 UTP14CQ5TAP6 766 aaKnown RBP29.13■■■□□ 2.25
COL13A1-210ENST00000517713 GADL1Q6ZQY3 521 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 SYN2Q92777 582 aaPredicted RBP29.13■■■□□ 2.25
COL13A1-210ENST00000517713 CARD6Q9BX69 1037 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 AGPAT3Q9NRZ7 376 aa29.13■■■□□ 2.25
COL13A1-210ENST00000517713 CTAGE9A4FU28 777 aa29.12■■■□□ 2.25
COL13A1-210ENST00000517713 PLS3P13797 630 aa29.12■■■□□ 2.25
COL13A1-210ENST00000517713 EIF4A3P38919 411 aaKnown RBP29.12■■■□□ 2.25
COL13A1-210ENST00000517713 PPATQ06203 517 aa29.12■■■□□ 2.25
COL13A1-210ENST00000517713 SPA17Q15506 151 aa29.12■■■□□ 2.25
COL13A1-210ENST00000517713 CCDC122Q5T0U0 273 aa29.12■■■□□ 2.25
COL13A1-210ENST00000517713 DPY19L2Q6NUT2 758 aa29.12■■■□□ 2.25
COL13A1-210ENST00000517713 SMAP1Q8IYB5 467 aaPredicted RBP29.12■■■□□ 2.25
COL13A1-210ENST00000517713 FAM186BQ8IYM0 893 aa29.12■■■□□ 2.25
COL13A1-210ENST00000517713 GOLGA5Q8TBA6 731 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms