RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SORCS2Q96PQ0 1159 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 DNAJC7Q99615 494 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 ZNF747Q9BV97 191 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 CELF4Q9BZC1 486 aaKnown RBP4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 OR10A5Q9H207 317 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 SMURF1Q9HCE7 757 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 MSL2Q9HCI7 577 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 SNTG2Q9NY99 539 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 FAM184BQ9ULE4 1060 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 COQ6Q9Y2Z9 468 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 ASB1Q9Y576 335 aa4.34□□□□□ -1.71
RNU6-1088P-201ENST00000516850 FAM221BA6H8Z2 402 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 FOXP2O15409 715 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 RASGRP1O95267 797 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MMEP08473 750 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 CD83Q01151 205 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 HHEXQ03014 270 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MAP3K12Q12852 859 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SERINC3Q13530 473 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MOGSQ13724 837 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 EIF4HQ15056 248 aaKnown RBP4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 STILQ15468 1287 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 GRAMD4Q6IC98 578 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 FILIP1Q7Z7B0 1213 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 THAP3Q8WTV1 239 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 DPYSL5Q9BPU6 564 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MRIQ9BWK5 157 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MRPL4Q9BYD3 311 aaKnown RBP4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 CSRNP2Q9H175 543 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 BTBD7Q9P203 1132 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 HS3ST3A1Q9Y663 406 aa4.33□□□□□ -1.72
RNU6-1088P-201ENST00000516850 ACO1P21399 889 aaKnown RBP4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 APEX1P27695 318 aaKnown RBP4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MRE11P49959 708 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 NFYCQ13952 458 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 PCOLCEQ15113 449 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 USP39Q53GS9 565 aaKnown RBP4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 TRIM61Q5EBN2 209 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 AGBL4Q5VU57 503 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 LRSAM1Q6UWE0 723 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 NOSTRINQ8IVI9 506 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 ZFPM1Q8IX07 1006 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 GSTCDQ8NEC7 633 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SLC7A14Q8TBB6 771 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 ASB15Q8WXK1 588 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 ERCC4Q92889 916 aaPredicted RBP4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 E2F7Q96AV8 911 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 AMNQ9BXJ7 453 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SCAND2PQ9GZW5 306 aaPredicted RBP4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 KIAA1683Q9H0B3 1180 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 OR10A2Q9H208 303 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 NELFAQ9H3P2 528 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SLC30A1Q9Y6M5 507 aa4.32□□□□□ -1.72
RNU6-1088P-201ENST00000516850 B4E1Z4 1266 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SDHAP31040 664 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 ACVRL1P37023 503 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 IRF9Q00978 393 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 FOXE3Q13461 319 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 ARHGAP44Q17R89 818 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 KANK2Q63ZY3 851 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 TMEM200BQ69YZ2 307 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 LARP4Q71RC2 724 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 OVCH1Q7RTY7 1134 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 BRAPQ7Z569 592 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 DDX53Q86TM3 631 aaKnown RBP4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 IGSF22Q8N9C0 903 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 PLA2G12BQ9BX93 195 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 B3GALT1Q9Y5Z6 326 aa4.31□□□□□ -1.72
RNU6-1088P-201ENST00000516850 TCRBV16S1A1N1A0A5B0 115 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 GOLGA6L22H0YM25 854 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 H2AFYO75367 372 aaKnown RBP4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 KRT37O76014 449 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MPIG6BO95866 241 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 HIBADHP31937 336 aaKnown RBP4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SESN2P58004 480 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 GRM7Q14831 915 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SEC23AQ15436 765 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 TBR1Q16650 682 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 TMEM177Q53S58 311 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 C2orf27AQ580R0 203 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 TRIM68Q6AZZ1 485 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 RNF207Q6ZRF8 634 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SGMS1Q86VZ5 419 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 C1orf210Q8IVY1 113 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 Q8N1X5 172 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 OR14K1Q8NGZ2 314 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 DLG3Q92796 817 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 SCLYQ96I15 445 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 BOCQ9BWV1 1114 aa4.3□□□□□ -1.72
RNU6-1088P-201ENST00000516850 PLD2O14939 933 aa4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 KCNQ2O43526 872 aa4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 MSX2P35548 267 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 RANGAP1P46060 587 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 STAT5BP51692 787 aa4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 NFE2L2Q16236 605 aa4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 CC2D1AQ6P1N0 951 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 JMYQ8N9B5 988 aa4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 EXTL1Q92935 676 aa4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 LPPQ93052 612 aa4.29□□□□□ -1.72
RNU6-1088P-201ENST00000516850 NCOA5Q9HCD5 579 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms