RNA–Protein interactions for RNA: ENST00000514213.6

USO1-204, Transcript of USO1 vesicle transport factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USO1, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-204ENST00000514213 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
USO1-204ENST00000514213 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
USO1-204ENST00000514213 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
USO1-204ENST00000514213 ZNF142P52746 1687 aaPredicted RBP12.09□□□□□ -0.47
USO1-204ENST00000514213 SMIM24O75264 130 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 FLOT1O75955 427 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 TTLL1O95922 423 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 CFBP00751 764 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 MYBP10242 640 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 ITGA4P13612 1032 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 MDH1P40925 334 aaKnown RBP12.08□□□□□ -0.47
USO1-204ENST00000514213 CASP4P49662 377 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 CTTNQ14247 550 aaKnown RBP12.08□□□□□ -0.47
USO1-204ENST00000514213 PTGISQ16647 500 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 ANKRD42Q8N9B4 389 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 ERMNQ8TAM6 284 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 SGSM3Q96HU1 749 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 TRIM51Q9BSJ1 452 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.47
USO1-204ENST00000514213 GLI3P10071 1580 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 DUOX1Q9NRD9 1551 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 CASP5P51878 434 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
USO1-204ENST00000514213 IFI16Q16666 785 aaKnown RBP12.08□□□□□ -0.48
USO1-204ENST00000514213 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 PARD3BQ8TEW8 1205 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 SAAL1Q96ER3 474 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 SH2D3AQ9BRG2 576 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 FBXL5Q9UKA1 691 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 GMNCA6NCL1 334 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 ZNF233A6NK53 670 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 M0R2N6 131 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 TTI1O43156 1089 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 SART1O43290 800 aaKnown RBP12.08□□□□□ -0.48
USO1-204ENST00000514213 FGGP02679 453 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 AMIGO3Q86WK7 504 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 MYH3P11055 1940 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 GRID2IPA4D2P6 1211 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
USO1-204ENST00000514213 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 THEMIS2Q5TEJ8 643 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
USO1-204ENST00000514213 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
USO1-204ENST00000514213 SLIT2O94813 1529 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 MED24O75448 989 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 TRIM49P0CI25 452 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 TRIM49CP0CI26 452 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 PLTPP55058 493 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 POLE2P56282 527 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 KCNA1Q09470 495 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 NAB2Q15742 525 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 QRICH1Q2TAL8 776 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 MRRFQ96E11 262 aaKnown RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 ANO3Q9BYT9 981 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 NOC2LQ9Y3T9 749 aaKnown RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 ECM29Q5VYK3 1845 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 PGRMC1O00264 195 aaKnown RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 TNFAIP3P21580 790 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 LRRC14Q15048 493 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 CCDC38Q502W7 563 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 FIGNQ5HY92 759 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 SLFN13Q68D06 897 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 OTUD6AQ7L8S5 288 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 ZNF571Q7Z3V5 609 aaPredicted RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 SCFD1Q8WVM8 642 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 IQCDQ96DY2 449 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 NUCKS1Q9H1E3 243 aaKnown RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 PCIF1Q9H4Z3 704 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 PTPN22Q9Y2R2 807 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 UTP11Q9Y3A2 253 aaKnown RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 CPP00450 1065 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 SLC8A1P32418 973 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 ZNF746Q6NUN9 644 aaPredicted RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 ZNF513Q8N8E2 541 aaPredicted RBP12.07□□□□□ -0.48
USO1-204ENST00000514213 ANKS1AQ92625 1134 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
USO1-204ENST00000514213 CICQ96RK0 1608 aaPredicted RBP12.06□□□□□ -0.48
USO1-204ENST00000514213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
USO1-204ENST00000514213 SSU72P8A0A1W2PR75 194 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 UCHL3P15374 230 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 STAT1P42224 750 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 ZC2HC1CQ53FD0 456 aaPredicted RBP12.06□□□□□ -0.48
USO1-204ENST00000514213 HGSNATQ68CP4 663 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 CCDC174Q6PII3 467 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 ATP6V1G3Q96LB4 118 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 DNAJC17Q9NVM6 304 aaKnown RBP12.06□□□□□ -0.48
USO1-204ENST00000514213 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
USO1-204ENST00000514213 LRP6O75581 1613 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms