RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	CD52	P31358	61 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	ME3	Q16798	604 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	IER5	Q5VY09	327 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	B3GNT9	Q6UX72	402 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	KIAA0319L	Q8IZA0	1049 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	MICALL1	Q8N3F8	863 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	NME8	Q8N427	588 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	BBX	Q8WY36	941 aa	Predicted RBP	13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	RIT2	Q99578	217 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	CELF4	Q9BZC1	486 aa	Known RBP	13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	UNC45A	Q9H3U1	944 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	CDHR5	Q9HBB8	845 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	RC3H2	Q9HBD1	1191 aa	Known RBP	13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	DISC1	Q9NRI5	854 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	THEG	Q9P2T0	379 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	MTUS1	Q9ULD2	1270 aa		13.63	□□□□□ -0.23
CHFR-208	ENST00000511001	WDR64	B1ANS9	1081 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	GTPBP6	O43824	516 aa	Predicted RBP	13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	CDKL5	O76039	1030 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	NONO	Q15233	471 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	ANKRD1	Q15327	319 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	UGCG	Q16739	394 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	INF2	Q27J81	1249 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	MOXD1	Q6UVY6	613 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	KRT25	Q7Z3Z0	450 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	NECAB1	Q8N987	351 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	ETNPPL	Q8TBG4	499 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	OXER1	Q8TDS5	423 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	TEKT3	Q9BXF9	490 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	ORC3	Q9UBD5	711 aa	Predicted RBP	13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	PADI3	Q9ULW8	664 aa		13.62	□□□□□ -0.23
CHFR-208	ENST00000511001	CHMP2A	O43633	222 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	GAS7	O60861	476 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	LINC00271	P0C7V0	271 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	ST3GAL1	Q11201	340 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	LRCH2	Q5VUJ6	765 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	CKAP2L	Q8IYA6	745 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	CRIPAK	Q8N1N5	446 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	LINC01465	Q8N7H1	131 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	TMEM40	Q8WWA1	233 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	GTF3C6	Q969F1	213 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	YME1L1	Q96TA2	773 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	TMX1	Q9H3N1	280 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	ERVK-5	Q9HDB9	667 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	TCEAL9	Q9UHQ7	104 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	SAMM50	Q9Y512	469 aa		13.61	□□□□□ -0.23
CHFR-208	ENST00000511001	BDP1	A6H8Y1	2624 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001		M0QZ92	97 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	SLC37A4	O43826	429 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	STBD1	O95210	358 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	OAT	P04181	439 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	SFN	P31947	248 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	NEK4	P51957	841 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	PRKCE	Q02156	737 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	TMEM266	Q2M3C6	531 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	EPC2	Q52LR7	807 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	EARS2	Q5JPH6	523 aa	Known RBP	13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	NSUN7	Q8NE18	718 aa	Known RBP	13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	FBXO22	Q8NEZ5	403 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	ADAMTS19	Q8TE59	1207 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	ZNF689	Q96CS4	500 aa	Predicted RBP	13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	LMCD1	Q9NZU5	365 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	NOC2L	Q9Y3T9	749 aa	Known RBP	13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	ARID2	Q68CP9	1835 aa		13.6	□□□□□ -0.23
CHFR-208	ENST00000511001	CCDC194	A0A1B0GVG4	234 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	FAM205C	A6NFA0	338 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	MGEA5	O60502	916 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	GPR32	O75388	356 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	VTN	P04004	478 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	CLCN3	P51790	818 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	JAK3	P52333	1124 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	TARBP2	Q15633	366 aa	Known RBP	13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	LETM2	Q2VYF4	491 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	MIER3	Q7Z3K6	550 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	TMEM192	Q8IY95	271 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	RDM1	Q8NG50	284 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	TNFRSF25	Q93038	417 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	FAM167A	Q96KS9	214 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	SAMD11	Q96NU1	681 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	ASB2	Q96Q27	587 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	CEP89	Q96ST8	783 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	PPP1R16B	Q96T49	567 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	FTHL17	Q9BXU8	183 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	DDX25	Q9UHL0	483 aa	Known RBP	13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	CEP131	Q9UPN4	1083 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	ADGRA3	Q8IWK6	1321 aa		13.59	□□□□□ -0.23
CHFR-208	ENST00000511001	EML1	O00423	815 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	MAGEB2	O15479	319 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	JAK2	O60674	1132 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	EIF5B	O60841	1220 aa	Known RBP	13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	DGKI	O75912	1065 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	XBP1	P17861	261 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	MRPS5	P82675	430 aa	Known RBP	13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	TFF2	Q03403	129 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	PAK2	Q13177	524 aa		13.58	□□□□□ -0.24
CHFR-208	ENST00000511001	NR5A1	Q13285	461 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms