RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
HMGCL-208ENST00000509389 PFKFB3Q16875 520 aaPredicted RBP16.54■□□□□ 0.24
HMGCL-208ENST00000509389 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 NIPA1Q7RTP0 329 aa16.54■□□□□ 0.24
HMGCL-208ENST00000509389 KHSRPQ92945 711 aaKnown RBP eCLIP16.54■□□□□ 0.24
HMGCL-208ENST00000509389 NSUN3Q9H649 340 aaKnown RBP16.54■□□□□ 0.24
HMGCL-208ENST00000509389 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 FAM86B1E9PN63 330 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 M0QZ92 97 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 DGKIO75912 1065 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 FAM86B2P0C5J1 330 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
HMGCL-208ENST00000509389 IL9P15248 144 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 IFNAR1P17181 557 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 SYT1P21579 422 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 BTG3Q14201 252 aaPredicted RBP16.53■□□□□ 0.24
HMGCL-208ENST00000509389 PTCRAQ6ISU1 281 aaPredicted RBP16.53■□□□□ 0.24
HMGCL-208ENST00000509389 MTHFD1LQ6UB35 978 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 ABHD15Q6UXT9 468 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 NEK9Q8TD19 979 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 CRYGNQ8WXF5 182 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 CLP1Q92989 425 aaKnown RBP16.53■□□□□ 0.24
HMGCL-208ENST00000509389 CELF4Q9BZC1 486 aaKnown RBP16.53■□□□□ 0.24
HMGCL-208ENST00000509389 RWDD3Q9Y3V2 267 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 EVPLQ92817 2033 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 IGSF9BQ9UPX0 1349 aa16.53■□□□□ 0.24
HMGCL-208ENST00000509389 IGLV3-22A0A075B6J6 115 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 H3BQ06 376 aaPredicted RBP16.52■□□□□ 0.24
HMGCL-208ENST00000509389 GRM6O15303 877 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 DHX15O43143 795 aaKnown RBP16.52■□□□□ 0.24
HMGCL-208ENST00000509389 SCG2P13521 617 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 PDCP20941 246 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 SLC26A2P50443 739 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 COL19A1Q14993 1142 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 FAM160B1Q5W0V3 765 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 FAM178BQ8IXR5 827 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 CRIPAKQ8N1N5 446 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 NME8Q8N427 588 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
HMGCL-208ENST00000509389 C11orf84Q9BUA3 381 aaPredicted RBP16.52■□□□□ 0.24
HMGCL-208ENST00000509389 FTHL17Q9BXU8 183 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 LMAN2LQ9H0V9 348 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 PADI3Q9ULW8 664 aa16.52■□□□□ 0.24
HMGCL-208ENST00000509389 KDM3AQ9Y4C1 1321 aa16.52■□□□□ 0.23
HMGCL-208ENST00000509389 CCDC196A0A1B0GTZ2 297 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 ESYT2A0FGR8 921 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 GRXCR2A6NFK2 248 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 BACH1O14867 736 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 HBP1O60381 514 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 CDKL5O76039 1030 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 CYP3A4P08684 503 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 KLRC1P26715 233 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 KRT76Q01546 638 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 PAK2Q13177 524 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 PKN1Q16512 942 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 CCDC60Q8IWA6 550 aaPredicted RBP16.51■□□□□ 0.23
HMGCL-208ENST00000509389 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 ZMYND12Q9H0C1 365 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 ZNF302Q9NR11 478 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 MTMR6Q9Y217 621 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 KIAA1671Q9BY89 1806 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 MYH9P35579 1960 aaKnown RBP16.51■□□□□ 0.23
HMGCL-208ENST00000509389 IPO5O00410 1097 aaKnown RBP16.51■□□□□ 0.23
HMGCL-208ENST00000509389 STX6O43752 255 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 PUS10Q3MIT2 529 aaKnown RBP16.51■□□□□ 0.23
HMGCL-208ENST00000509389 SWSAP1Q6NVH7 229 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 MIS18BP1Q6P0N0 1132 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 PDXDC2PQ6P474 469 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 EP400NLQ6ZTU2 488 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 NPAS4Q8IUM7 802 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 ATP8B4Q8TF62 1192 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 LRFN3Q9BTN0 628 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 C6orf50Q9HD87 102 aa16.51■□□□□ 0.23
HMGCL-208ENST00000509389 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
HMGCL-208ENST00000509389 COL1A2P08123 1366 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 PRPF3O43395 683 aaKnown RBP16.5■□□□□ 0.23
HMGCL-208ENST00000509389 STAG3L1P0CL83 205 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 ATP4AP20648 1035 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 TMEM266Q2M3C6 531 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 ZNF484Q5JVG2 852 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 MCTP2Q6DN12 878 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 CMTR2Q8IYT2 770 aaKnown RBP16.5■□□□□ 0.23
HMGCL-208ENST00000509389 KIAA0319LQ8IZA0 1049 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 GJD3Q8N144 294 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 REXO1Q8N1G1 1221 aaKnown RBP16.5■□□□□ 0.23
HMGCL-208ENST00000509389 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
HMGCL-208ENST00000509389 ZNF577Q9BSK1 485 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 PLVAPQ9BX97 442 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 TMX1Q9H3N1 280 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 CLDND1Q9NY35 253 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
HMGCL-208ENST00000509389 WDR81Q562E7 1941 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 ZBTB42B2RXF5 422 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 PI4K2BG5E9Z4 385 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 NCK2O43639 380 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
HMGCL-208ENST00000509389 TMEM31Q5JXX7 168 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms