RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 HGFACQ04756 655 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 SSRP1Q08945 709 aaKnown RBP6.24□□□□□ -1.41
SMC4-227ENST00000497984 MTERF2Q49AM1 385 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 TM4SF20Q53R12 229 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 GPR135Q8IZ08 494 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 IGSF5Q9NSI5 407 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 UCKL1Q9NWZ5 548 aa6.24□□□□□ -1.41
SMC4-227ENST00000497984 A0A0G2JNJ9 132 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 CRTAMO95727 393 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 MMEP08473 750 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 FAM153BP0C7A2 387 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 MSX2P35548 267 aaPredicted RBP6.23□□□□□ -1.41
SMC4-227ENST00000497984 MRE11P49959 708 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 FAM47CQ5HY64 1035 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 FSTL4Q6MZW2 842 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 EP400NLQ6ZTU2 488 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 FILIP1Q7Z7B0 1213 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 CKAP2LQ8IYA6 745 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 CHFRQ96EP1 664 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 CCDC113Q9H0I3 377 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 OR10A5Q9H207 317 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 OR10A2Q9H208 303 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 PLA2G3Q9NZ20 509 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 Q9UFV3 132 aa6.23□□□□□ -1.41
SMC4-227ENST00000497984 GSTA4O15217 222 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 STK10O94804 968 aaKnown RBP6.22□□□□□ -1.41
SMC4-227ENST00000497984 MCM7P33993 719 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 DNM2P50570 870 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 MOGSQ13724 837 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 FNDC7Q5VTL7 733 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 OTOP2Q7RTS6 562 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 ZC3H7AQ8IWR0 971 aaKnown RBP6.22□□□□□ -1.41
SMC4-227ENST00000497984 ASB15Q8WXK1 588 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 PLEKHG4BQ96PX9 1271 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 DHRS4Q9BTZ2 278 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 TRIM8Q9BZR9 551 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 TLR9Q9NR96 1032 aa6.22□□□□□ -1.41
SMC4-227ENST00000497984 DPTQ07507 201 aa6.21□□□□□ -1.42
SMC4-227ENST00000497984 OR14K1Q8NGZ2 314 aa6.21□□□□□ -1.42
SMC4-227ENST00000497984 IPO9Q96P70 1041 aaKnown RBP6.21□□□□□ -1.42
SMC4-227ENST00000497984 NELFAQ9H3P2 528 aa6.21□□□□□ -1.42
SMC4-227ENST00000497984 ZNF703Q9H7S9 590 aaPredicted RBP6.21□□□□□ -1.42
SMC4-227ENST00000497984 AGO3Q9H9G7 860 aaKnown RBP6.21□□□□□ -1.42
SMC4-227ENST00000497984 MRPS23Q9Y3D9 190 aaKnown RBP6.21□□□□□ -1.42
SMC4-227ENST00000497984 PMS2P1A4D2B8 440 aa6.2□□□□□ -1.42
SMC4-227ENST00000497984 RASSF10A6NK89 507 aa6.2□□□□□ -1.42
SMC4-227ENST00000497984 U2SURPO15042 1029 aaKnown RBP6.2□□□□□ -1.42
SMC4-227ENST00000497984 HIBADHP31937 336 aaKnown RBP6.2□□□□□ -1.42
SMC4-227ENST00000497984 MEOX1P50221 254 aa6.2□□□□□ -1.42
SMC4-227ENST00000497984 PURAQ00577 322 aaKnown RBP6.2□□□□□ -1.42
SMC4-227ENST00000497984 GRAMD4Q6IC98 578 aa6.2□□□□□ -1.42
SMC4-227ENST00000497984 BCL6BQ8N143 479 aaPredicted RBP6.2□□□□□ -1.42
SMC4-227ENST00000497984 CISD2Q8N5K1 135 aaKnown RBP6.2□□□□□ -1.42
SMC4-227ENST00000497984 IKZF4Q9H2S9 585 aa6.2□□□□□ -1.42
SMC4-227ENST00000497984 SLC52A2Q9HAB3 445 aa6.2□□□□□ -1.42
SMC4-227ENST00000497984 KCNH7Q9NS40 1196 aa6.2□□□□□ -1.42
SMC4-227ENST00000497984 HECAQ9UBI9 543 aaPredicted RBP6.2□□□□□ -1.42
SMC4-227ENST00000497984 WDR33Q9C0J8 1336 aaKnown RBP6.2□□□□□ -1.42
SMC4-227ENST00000497984 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.19□□□□□ -1.42
SMC4-227ENST00000497984 SCDO00767 359 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 MAFO75444 373 aaPredicted RBP6.19□□□□□ -1.42
SMC4-227ENST00000497984 STAT5BP51692 787 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 GRM7Q14831 915 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 LONRF2Q1L5Z9 754 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 RTKN2Q8IZC4 609 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 GSTCDQ8NEC7 633 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 DLG3Q92796 817 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 GBP4Q96PP9 640 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 ASB1Q9Y576 335 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 B3GALT1Q9Y5Z6 326 aa6.19□□□□□ -1.42
SMC4-227ENST00000497984 PRAMEF22A3QJZ6 481 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 CCDC85CA6NKD9 419 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 SLC26A4O43511 780 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 TUBA3CQ13748 450 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
SMC4-227ENST00000497984 NBPF6Q5VWK0 638 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 SPTY2D1Q68D10 685 aaPredicted RBP6.18□□□□□ -1.42
SMC4-227ENST00000497984 TUBA3EQ6PEY2 450 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 ADGRE4PQ86SQ3 457 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 SHCBP1Q8NEM2 672 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 NBPF4Q96M43 638 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 CEP89Q96ST8 783 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 CELF4Q9BZC1 486 aaKnown RBP6.18□□□□□ -1.42
SMC4-227ENST00000497984 CEP72Q9P209 647 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 COQ6Q9Y2Z9 468 aa6.18□□□□□ -1.42
SMC4-227ENST00000497984 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 FOXP2O15409 715 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 SDHAP31040 664 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 INHBEP58166 350 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 OVCH1Q7RTY7 1134 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 LDLRAD3Q86YD5 345 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 D2HGDHQ8N465 521 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 WDR48Q8TAF3 677 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 SLC7A14Q8TBB6 771 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 NEU4Q8WWR8 484 aaPredicted RBP6.17□□□□□ -1.42
SMC4-227ENST00000497984 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
SMC4-227ENST00000497984 AURKAIP1Q9NWT8 199 aaPredicted RBP6.17□□□□□ -1.42
SMC4-227ENST00000497984 NDOR1Q9UHB4 597 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms