RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	KDM3A	Q9Y4C1	1321 aa		12.36	□□□□□ -0.43
DCTN1-223	ENST00000495643	BTBD18	B2RXH4	712 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	CCNT1	O60563	726 aa	Known RBP	12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	STBD1	O95210	358 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	HTRA4	P83105	476 aa	Predicted RBP	12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	PRKCE	Q02156	737 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	TRMT1L	Q7Z2T5	733 aa	Known RBP	12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	MIER3	Q7Z3K6	550 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	SPRED2	Q7Z698	418 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	CCDC83	Q8IWF9	413 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	MYOCD	Q8IZQ8	938 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	USP38	Q8NB14	1042 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	SLC17A8	Q8NDX2	589 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	HAS1	Q92839	578 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	TOP1MT	Q969P6	601 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	FAM167A	Q96KS9	214 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	FAM20A	Q96MK3	541 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	GAS2L1	Q99501	681 aa	Predicted RBP	12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	NAP1L4	Q99733	375 aa	Known RBP	12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	BRMS1	Q9HCU9	246 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	NRBP2	Q9NSY0	501 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	VAV3	Q9UKW4	847 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	TRPV2	Q9Y5S1	764 aa		12.35	□□□□□ -0.43
DCTN1-223	ENST00000495643	TTC3	P53804	2025 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	EPOP	A6NHQ4	379 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643		M0QZ92	97 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	ENPP3	O14638	875 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	TBX3	O15119	743 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	OAT	P04181	439 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	CD52	P31358	61 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	FOSB	P53539	338 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	PPP2R5C	Q13362	524 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	FAM117B	Q6P1L5	589 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	DIS3L2	Q8IYB7	885 aa	Known RBP	12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	LINC01465	Q8N7H1	131 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	CERS4	Q9HA82	394 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	CDHR5	Q9HBB8	845 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	CEP131	Q9UPN4	1083 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	INSL6	Q9Y581	213 aa		12.34	□□□□□ -0.43
DCTN1-223	ENST00000495643	COL4A4	P53420	1690 aa	Predicted RBP	12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	COL4A6	Q14031	1691 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	LINC01553	A4QN01	128 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	RFXAP	O00287	272 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	EML1	O00423	815 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	MAGEB2	O15479	319 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	POU3F3	P20264	500 aa	Predicted RBP	12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	TRIM29	Q14134	588 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	RABEP1	Q15276	862 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	TARBP2	Q15633	366 aa	Known RBP	12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	POTED	Q86YR6	584 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	SP7	Q8TDD2	431 aa	Predicted RBP	12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	LINC01599	Q8WXQ3	324 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	CEP89	Q96ST8	783 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	NIFK	Q9BYG3	293 aa	Known RBP	12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	PADI3	Q9ULW8	664 aa		12.33	□□□□□ -0.44
DCTN1-223	ENST00000495643	NLRC5	Q86WI3	1866 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	WNT7A	O00755	349 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	GPR32	O75388	356 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	UPP2	O95045	317 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	ERVK-21	P61565	698 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	SPIRE1	Q08AE8	756 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	XKR3	Q5GH77	459 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	EFCAB12	Q6NXP0	572 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	CRIPAK	Q8N1N5	446 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	METTL13	Q8N6R0	699 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	BANK1	Q8NDB2	785 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	TMEM40	Q8WWA1	233 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	ARNTL2	Q8WYA1	636 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	TMX1	Q9H3N1	280 aa		12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	NOC2L	Q9Y3T9	749 aa	Known RBP	12.32	□□□□□ -0.44
DCTN1-223	ENST00000495643	TMEM150B	A6NC51	233 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	LPXN	O60711	386 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	VTN	P04004	478 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	IGFBP4	P22692	258 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	CLCN3	P51790	818 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	CRYBB1	P53674	252 aa	Predicted RBP	12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	PSMC5	P62195	406 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	HMGN5	P82970	282 aa	Known RBP	12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	GUCY1B3	Q02153	619 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	PAK2	Q13177	524 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	KIZ	Q2M2Z5	673 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	TMEM266	Q2M3C6	531 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	ANO5	Q75V66	913 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	SLFN12	Q8IYM2	578 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	LRRC71	Q8N4P6	559 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	IL27	Q8NEV9	243 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	FBXO18	Q8NFZ0	1043 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	C8orf76	Q96K31	380 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	TGS1	Q96RS0	853 aa	Known RBP	12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	FTHL17	Q9BXU8	183 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	ADAMTS10	Q9H324	1103 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	RC3H2	Q9HBD1	1191 aa	Known RBP	12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	ERVK-5	Q9HDB9	667 aa		12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.31	□□□□□ -0.44
DCTN1-223	ENST00000495643	MTCH2	Q9Y6C9	303 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms