RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 RBM25P49756 843 aaKnown RBP20.28■□□□□ 0.84
COL20A1-207ENST00000494913 UGCGQ16739 394 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 KRT40Q6A162 431 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 TSHZ1Q6ZSZ6 1077 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 METTL13Q8N6R0 699 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 RDM1Q8NG50 284 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 ARNTL2Q8WYA1 636 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 ZSCAN31Q96LW9 406 aaPredicted RBP20.28■□□□□ 0.84
COL20A1-207ENST00000494913 AGO3Q9H9G7 860 aaKnown RBP20.28■□□□□ 0.84
COL20A1-207ENST00000494913 INSL6Q9Y581 213 aa20.28■□□□□ 0.84
COL20A1-207ENST00000494913 TRANK1O15050 2925 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 BTBD18B2RXH4 712 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 RFXAPO00287 272 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 C22orf31O95567 290 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 MMP1P03956 469 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 CD52P31358 61 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 PRKCEQ02156 737 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 B3GNT9Q6UX72 402 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 TNFRSF25Q93038 417 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 TOP1MTQ969P6 601 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 FAM20AQ96MK3 541 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 NAP1L4Q99733 375 aaKnown RBP20.27■□□□□ 0.84
COL20A1-207ENST00000494913 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.84
COL20A1-207ENST00000494913 KCNMB3Q9NPA1 279 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 CEP131Q9UPN4 1083 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 GINS2Q9Y248 185 aa20.27■□□□□ 0.84
COL20A1-207ENST00000494913 EPOPA6NHQ4 379 aa20.26■□□□□ 0.83
COL20A1-207ENST00000494913 MARCH6O60337 910 aa20.26■□□□□ 0.83
COL20A1-207ENST00000494913 OATP04181 439 aa20.26■□□□□ 0.83
COL20A1-207ENST00000494913 SPRED2Q7Z698 418 aa20.26■□□□□ 0.83
COL20A1-207ENST00000494913 DIS3L2Q8IYB7 885 aaKnown RBP20.26■□□□□ 0.83
COL20A1-207ENST00000494913 PPM1EQ8WY54 764 aa20.26■□□□□ 0.83
COL20A1-207ENST00000494913 SQORQ9Y6N5 450 aa20.26■□□□□ 0.83
COL20A1-207ENST00000494913 SIP14410 1827 aa20.25■□□□□ 0.83
COL20A1-207ENST00000494913 ENPP3O14638 875 aa20.25■□□□□ 0.83
COL20A1-207ENST00000494913 USP38Q8NB14 1042 aa20.25■□□□□ 0.83
COL20A1-207ENST00000494913 LLPHQ9BRT6 129 aaKnown RBP20.25■□□□□ 0.83
COL20A1-207ENST00000494913 SH2B1Q9NRF2 756 aaPredicted RBP20.25■□□□□ 0.83
COL20A1-207ENST00000494913 PADI3Q9ULW8 664 aa20.25■□□□□ 0.83
COL20A1-207ENST00000494913 EVPLQ92817 2033 aa20.25■□□□□ 0.83
COL20A1-207ENST00000494913 KDM3AQ9Y4C1 1321 aa20.25■□□□□ 0.83
COL20A1-207ENST00000494913 WDR81Q562E7 1941 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 LINC01553A4QN01 128 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 MAGEB2O15479 319 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 HTRA4P83105 476 aaPredicted RBP20.24■□□□□ 0.83
COL20A1-207ENST00000494913 HAS1Q92839 578 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 PPP1R16BQ96T49 567 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 YME1L1Q96TA2 773 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 CDHR5Q9HBB8 845 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 MTUS1Q9ULD2 1270 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 EML1O00423 815 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 TBX3O15119 743 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 GUCY1B3Q02153 619 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 PAK2Q13177 524 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 PPP2R5CQ13362 524 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 RABEP1Q15276 862 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 CCDC85BQ15834 202 aaPredicted RBP20.24■□□□□ 0.83
COL20A1-207ENST00000494913 TMEM266Q2M3C6 531 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 EFCAB12Q6NXP0 572 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.24■□□□□ 0.83
COL20A1-207ENST00000494913 BANK1Q8NDB2 785 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 VAV3Q9UKW4 847 aa20.24■□□□□ 0.83
COL20A1-207ENST00000494913 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
COL20A1-207ENST00000494913 VTNP04004 478 aa20.23■□□□□ 0.83
COL20A1-207ENST00000494913 CLCN3P51790 818 aa20.23■□□□□ 0.83
COL20A1-207ENST00000494913 KIZQ2M2Z5 673 aa20.23■□□□□ 0.83
COL20A1-207ENST00000494913 XKR3Q5GH77 459 aa20.23■□□□□ 0.83
COL20A1-207ENST00000494913 C8orf76Q96K31 380 aa20.23■□□□□ 0.83
COL20A1-207ENST00000494913 TGS1Q96RS0 853 aaKnown RBP20.23■□□□□ 0.83
COL20A1-207ENST00000494913 SUGCTQ9HAC7 445 aa20.23■□□□□ 0.83
COL20A1-207ENST00000494913 TMEM150BA6NC51 233 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 DDX11L8A8MPP1 907 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 TMOD1P28289 359 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 ERVK-21P61565 698 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 PSMC5P62195 406 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 TBC1D8BQ0IIM8 1120 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 NFX1Q12986 1120 aaKnown RBP20.22■□□□□ 0.83
COL20A1-207ENST00000494913 SAFBQ15424 915 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL20A1-207ENST00000494913 RTN4RL1Q86UN2 441 aaPredicted RBP20.22■□□□□ 0.83
COL20A1-207ENST00000494913 MICALL1Q8N3F8 863 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 LRRC71Q8N4P6 559 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 FTHL17Q9BXU8 183 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 NIFKQ9BYG3 293 aaKnown RBP20.22■□□□□ 0.83
COL20A1-207ENST00000494913 SEPT9Q9UHD8 586 aaPredicted RBP20.22■□□□□ 0.83
COL20A1-207ENST00000494913 AKT3Q9Y243 479 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 NOC2LQ9Y3T9 749 aaKnown RBP20.22■□□□□ 0.83
COL20A1-207ENST00000494913 LOXHD1Q8IVV2 1947 aa20.22■□□□□ 0.83
COL20A1-207ENST00000494913 RPS6KA5O75582 802 aa20.21■□□□□ 0.83
COL20A1-207ENST00000494913 STBD1O95210 358 aa20.21■□□□□ 0.83
COL20A1-207ENST00000494913 CRYBB1P53674 252 aaPredicted RBP20.21■□□□□ 0.83
COL20A1-207ENST00000494913 HMGN5P82970 282 aaKnown RBP20.21■□□□□ 0.83
COL20A1-207ENST00000494913 TARBP2Q15633 366 aaKnown RBP20.21■□□□□ 0.83
COL20A1-207ENST00000494913 MTERF2Q49AM1 385 aa20.21■□□□□ 0.83
COL20A1-207ENST00000494913 SLFN12Q8IYM2 578 aa20.21■□□□□ 0.83
COL20A1-207ENST00000494913 SP7Q8TDD2 431 aaPredicted RBP20.21■□□□□ 0.83
COL20A1-207ENST00000494913 TMEM40Q8WWA1 233 aa20.21■□□□□ 0.83
COL20A1-207ENST00000494913 LINC01599Q8WXQ3 324 aa20.21■□□□□ 0.83
COL20A1-207ENST00000494913 MAP7D2Q96T17 732 aa20.21■□□□□ 0.83
COL20A1-207ENST00000494913 SH2D3AQ9BRG2 576 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms