RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 C22orf31O95567 290 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 OATP04181 439 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 PRKCEQ02156 737 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 NR5A1Q13285 461 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 UGCGQ16739 394 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 EARS2Q5JPH6 523 aaKnown RBP37.45■■■■□ 3.59
CBX4-203ENST00000494546 METTL13Q8N6R0 699 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 NRBP2Q9NSY0 501 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 MTUS1Q9ULD2 1270 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 GINS2Q9Y248 185 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 SQORQ9Y6N5 450 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 MYH9P35579 1960 aaKnown RBP37.45■■■■□ 3.59
CBX4-203ENST00000494546 CHD7Q9P2D1 2997 aa37.45■■■■□ 3.59
CBX4-203ENST00000494546 LINC01553A4QN01 128 aa37.44■■■■□ 3.58
CBX4-203ENST00000494546 HTRA4P83105 476 aaPredicted RBP37.44■■■■□ 3.58
CBX4-203ENST00000494546 MICALL1Q8N3F8 863 aa37.44■■■■□ 3.58
CBX4-203ENST00000494546 RDM1Q8NG50 284 aa37.44■■■■□ 3.58
CBX4-203ENST00000494546 YME1L1Q96TA2 773 aa37.44■■■■□ 3.58
CBX4-203ENST00000494546 GCFC2P16383 781 aaKnown RBP37.43■■■■□ 3.58
CBX4-203ENST00000494546 TRIM29Q14134 588 aa37.43■■■■□ 3.58
CBX4-203ENST00000494546 PPP4R3AQ6IN85 833 aa37.43■■■■□ 3.58
CBX4-203ENST00000494546 KIF2CQ99661 725 aa37.43■■■■□ 3.58
CBX4-203ENST00000494546 KDM3AQ9Y4C1 1321 aa37.42■■■■□ 3.58
CBX4-203ENST00000494546 FAM205CA6NFA0 338 aa37.42■■■■□ 3.58
CBX4-203ENST00000494546 B3GNT9Q6UX72 402 aa37.42■■■■□ 3.58
CBX4-203ENST00000494546 CCDC83Q8IWF9 413 aa37.42■■■■□ 3.58
CBX4-203ENST00000494546 TGS1Q96RS0 853 aaKnown RBP37.42■■■■□ 3.58
CBX4-203ENST00000494546 NAP1L4Q99733 375 aaKnown RBP37.42■■■■□ 3.58
CBX4-203ENST00000494546 ENPP3O14638 875 aa37.41■■■■□ 3.58
CBX4-203ENST00000494546 PAK2Q13177 524 aa37.41■■■■□ 3.58
CBX4-203ENST00000494546 PPP1R16BQ96T49 567 aa37.41■■■■□ 3.58
CBX4-203ENST00000494546 PADI3Q9ULW8 664 aa37.41■■■■□ 3.58
CBX4-203ENST00000494546 GTPBP6O43824 516 aaPredicted RBP37.4■■■■□ 3.58
CBX4-203ENST00000494546 MMP1P03956 469 aa37.4■■■■□ 3.58
CBX4-203ENST00000494546 KRT40Q6A162 431 aa37.4■■■■□ 3.58
CBX4-203ENST00000494546 TNFRSF25Q93038 417 aa37.4■■■■□ 3.58
CBX4-203ENST00000494546 FAM20AQ96MK3 541 aa37.4■■■■□ 3.58
CBX4-203ENST00000494546 KCNMB3Q9NPA1 279 aa37.4■■■■□ 3.58
CBX4-203ENST00000494546 MAGEB2O15479 319 aa37.39■■■■□ 3.58
CBX4-203ENST00000494546 MARCH6O60337 910 aa37.39■■■■□ 3.58
CBX4-203ENST00000494546 ERVK-21P61565 698 aa37.39■■■■□ 3.58
CBX4-203ENST00000494546 TMEM266Q2M3C6 531 aa37.39■■■■□ 3.58
CBX4-203ENST00000494546 CDHR5Q9HBB8 845 aa37.39■■■■□ 3.58
CBX4-203ENST00000494546 BTBD18B2RXH4 712 aa37.38■■■■□ 3.57
CBX4-203ENST00000494546 VTNP04004 478 aa37.38■■■■□ 3.57
CBX4-203ENST00000494546 CLCN3P51790 818 aa37.38■■■■□ 3.57
CBX4-203ENST00000494546 GRB10Q13322 594 aa37.38■■■■□ 3.57
CBX4-203ENST00000494546 DIS3L2Q8IYB7 885 aaKnown RBP37.38■■■■□ 3.57
CBX4-203ENST00000494546 SP7Q8TDD2 431 aaPredicted RBP37.38■■■■□ 3.57
CBX4-203ENST00000494546 FTHL17Q9BXU8 183 aa37.38■■■■□ 3.57
CBX4-203ENST00000494546 MTCH2Q9Y6C9 303 aa37.38■■■■□ 3.57
CBX4-203ENST00000494546 NFX1Q12986 1120 aaKnown RBP37.37■■■■□ 3.57
CBX4-203ENST00000494546 KIZQ2M2Z5 673 aa37.37■■■■□ 3.57
CBX4-203ENST00000494546 EFCAB12Q6NXP0 572 aa37.37■■■■□ 3.57
CBX4-203ENST00000494546 LRRC71Q8N4P6 559 aa37.37■■■■□ 3.57
CBX4-203ENST00000494546 BANK1Q8NDB2 785 aa37.37■■■■□ 3.57
CBX4-203ENST00000494546 GDPD5Q8WTR4 605 aa37.37■■■■□ 3.57
CBX4-203ENST00000494546 LINC01599Q8WXQ3 324 aa37.37■■■■□ 3.57
CBX4-203ENST00000494546 PRDM6Q9NQX0 595 aa37.37■■■■□ 3.57
CBX4-203ENST00000494546 SEPT9Q9UHD8 586 aaPredicted RBP37.37■■■■□ 3.57
CBX4-203ENST00000494546 RBM25P49756 843 aaKnown RBP37.36■■■■□ 3.57
CBX4-203ENST00000494546 POTEDQ86YR6 584 aa37.36■■■■□ 3.57
CBX4-203ENST00000494546 ZSCAN31Q96LW9 406 aaPredicted RBP37.36■■■■□ 3.57
CBX4-203ENST00000494546 C17orf80Q9BSJ5 609 aa37.36■■■■□ 3.57
CBX4-203ENST00000494546 VAV3Q9UKW4 847 aa37.36■■■■□ 3.57
CBX4-203ENST00000494546 AKT3Q9Y243 479 aa37.36■■■■□ 3.57
CBX4-203ENST00000494546 WDR81Q562E7 1941 aa37.36■■■■□ 3.57
CBX4-203ENST00000494546 EML1O00423 815 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 RPS6KA5O75582 802 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 POU3F3P20264 500 aaPredicted RBP37.35■■■■□ 3.57
CBX4-203ENST00000494546 TMOD1P28289 359 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 PPP2R5CQ13362 524 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 TMEM40Q8WWA1 233 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 HAS1Q92839 578 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 MAP7D2Q96T17 732 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 OSMRQ99650 979 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 LLPHQ9BRT6 129 aaKnown RBP37.35■■■■□ 3.57
CBX4-203ENST00000494546 SUGCTQ9HAC7 445 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 NOC2LQ9Y3T9 749 aaKnown RBP37.35■■■■□ 3.57
CBX4-203ENST00000494546 EVPLQ92817 2033 aa37.35■■■■□ 3.57
CBX4-203ENST00000494546 TBX3O15119 743 aa37.34■■■■□ 3.57
CBX4-203ENST00000494546 LPXNO60711 386 aa37.34■■■■□ 3.57
CBX4-203ENST00000494546 TBC1D8BQ0IIM8 1120 aa37.34■■■■□ 3.57
CBX4-203ENST00000494546 XKR3Q5GH77 459 aa37.34■■■■□ 3.57
CBX4-203ENST00000494546 RTN4RL1Q86UN2 441 aaPredicted RBP37.34■■■■□ 3.57
CBX4-203ENST00000494546 TMEM150BA6NC51 233 aa37.33■■■■□ 3.57
CBX4-203ENST00000494546 DLL1O00548 723 aa37.33■■■■□ 3.57
CBX4-203ENST00000494546 CRYBB1P53674 252 aaPredicted RBP37.33■■■■□ 3.57
CBX4-203ENST00000494546 GUCY1B3Q02153 619 aa37.33■■■■□ 3.57
CBX4-203ENST00000494546 MTERF2Q49AM1 385 aa37.33■■■■□ 3.57
CBX4-203ENST00000494546 TMX1Q9H3N1 280 aa37.33■■■■□ 3.57
CBX4-203ENST00000494546 SH2B1Q9NRF2 756 aaPredicted RBP37.33■■■■□ 3.57
CBX4-203ENST00000494546 PRUNE2Q8WUY3 3088 aa37.33■■■■□ 3.57
CBX4-203ENST00000494546 LOXHD1Q8IVV2 1947 aa37.32■■■■□ 3.57
CBX4-203ENST00000494546 GPR32O75388 356 aa37.32■■■■□ 3.56
CBX4-203ENST00000494546 PSMC5P62195 406 aa37.32■■■■□ 3.56
CBX4-203ENST00000494546 LINC01465Q8N7H1 131 aa37.32■■■■□ 3.56
CBX4-203ENST00000494546 FBXO22Q8NEZ5 403 aa37.32■■■■□ 3.56
CBX4-203ENST00000494546 SH2D3AQ9BRG2 576 aa37.32■■■■□ 3.56
CBX4-203ENST00000494546 NIFKQ9BYG3 293 aaKnown RBP37.32■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms