RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 GRM6O15303 877 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 MMP1P03956 469 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 PSAPP07602 524 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 PRR16Q569H4 304 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 EP400NLQ6ZTU2 488 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 FAM178BQ8IXR5 827 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 KIAA0319LQ8IZA0 1049 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 P2RX5Q93086 422 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 UIMC1Q96RL1 719 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 SLC26A6Q9BXS9 759 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 TMX1Q9H3N1 280 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 EPHX3Q9H6B9 360 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
PTPRU-208ENST00000493601 CLDND1Q9NY35 253 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 LRFN2Q9ULH4 789 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 GINS2Q9Y248 185 aa18.84■□□□□ 0.61
PTPRU-208ENST00000493601 MAFBQ9Y5Q3 323 aaPredicted RBP18.84■□□□□ 0.61
PTPRU-208ENST00000493601 MRPL42Q9Y6G3 142 aaKnown RBP18.84■□□□□ 0.61
PTPRU-208ENST00000493601 ADAMTS3O15072 1205 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 RPS6KA5O75582 802 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 C22orf31O95567 290 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 IL9P15248 144 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 IFNAR1P17181 557 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 CIITAP33076 1130 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 SARSP49591 514 aaKnown RBP18.83■□□□□ 0.6
PTPRU-208ENST00000493601 NFX1Q12986 1120 aaKnown RBP18.83■□□□□ 0.6
PTPRU-208ENST00000493601 NTRK3Q16288 839 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 TMEM266Q2M3C6 531 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 NAALADL2Q58DX5 795 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 RASGRP4Q8TDF6 673 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 FAM167AQ96KS9 214 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 ERVK-5Q9HDB9 667 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 CEP131Q9UPN4 1083 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 PCDHA10Q9Y5I2 948 aa18.83■□□□□ 0.6
PTPRU-208ENST00000493601 DENND3A2RUS2 1198 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 WDR64B1ANS9 1081 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 EPB41L2O43491 1005 aaKnown RBP18.82■□□□□ 0.6
PTPRU-208ENST00000493601 ATP4AP20648 1035 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 PDIA3P30101 505 aaKnown RBP18.82■□□□□ 0.6
PTPRU-208ENST00000493601 SSTR3P32745 418 aaPredicted RBP18.82■□□□□ 0.6
PTPRU-208ENST00000493601 EVCP57679 992 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 PAN2Q504Q3 1202 aaKnown RBP18.82■□□□□ 0.6
PTPRU-208ENST00000493601 SH3GLB2Q9NR46 395 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 C1orf112Q9NSG2 853 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 VPS54Q9P1Q0 977 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 SAMM50Q9Y512 469 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 MYO7AQ13402 2215 aa18.82■□□□□ 0.6
PTPRU-208ENST00000493601 FNDC1Q4ZHG4 1894 aaPredicted RBP18.82■□□□□ 0.6
PTPRU-208ENST00000493601 GPR182O15218 404 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 PPFIA3O75145 1194 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 CRYBB1P53674 252 aaPredicted RBP18.81■□□□□ 0.6
PTPRU-208ENST00000493601 TMEM31Q5JXX7 168 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 RUFY3Q7L099 469 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 TRIM22Q8IYM9 498 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 GJD3Q8N144 294 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 METTL13Q8N6R0 699 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 TMEM40Q8WWA1 233 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 PPP2R3CQ969Q6 453 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 LENG9Q96B70 501 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 NCOA5Q9HCD5 579 aaKnown RBP18.81■□□□□ 0.6
PTPRU-208ENST00000493601 ALG13Q9NP73 1137 aaKnown RBP18.81■□□□□ 0.6
PTPRU-208ENST00000493601 CD320Q9NPF0 282 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 GABBR1Q9UBS5 961 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 RAPGEFL1Q9UHV5 662 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 NOC2LQ9Y3T9 749 aaKnown RBP18.81■□□□□ 0.6
PTPRU-208ENST00000493601 PCDHB7Q9Y5E2 793 aa18.81■□□□□ 0.6
PTPRU-208ENST00000493601 PLXNA4Q9HCM2 1894 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 C5orf42Q9H799 3197 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 USP11P51784 963 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 CCT2P78371 535 aaKnown RBP18.8■□□□□ 0.6
PTPRU-208ENST00000493601 HYAL1Q12794 435 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 KIZQ2M2Z5 673 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 CTC1Q2NKJ3 1217 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 KHSRPQ92945 711 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPRU-208ENST00000493601 ADAM2Q99965 735 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 CDHR5Q9HBB8 845 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 ST3GAL5Q9UNP4 418 aa18.8■□□□□ 0.6
PTPRU-208ENST00000493601 PI4K2BG5E9Z4 385 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 MAGEB2O15479 319 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 MGEA5O60502 916 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 GAS7O60861 476 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 CSPG5O95196 566 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 VTNP04004 478 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 ITGB1P05556 798 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 IBSPP21815 317 aaPredicted RBP18.79■□□□□ 0.6
PTPRU-208ENST00000493601 NLRP5P59047 1200 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 SLC24A5Q71RS6 500 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 TRMT1LQ7Z2T5 733 aaKnown RBP18.79■□□□□ 0.6
PTPRU-208ENST00000493601 ZNF710Q8N1W2 664 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 MAP7D2Q96T17 732 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 PPP1R16BQ96T49 567 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 RIT2Q99578 217 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 OSMRQ99650 979 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 LRFN3Q9BTN0 628 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 C22orf23Q9BZE7 217 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 DISC1Q9NRI5 854 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 RGS18Q9NS28 235 aa18.79■□□□□ 0.6
PTPRU-208ENST00000493601 PRKAG3Q9UGI9 489 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms