RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FNDC1Q4ZHG4 1894 aaPredicted RBP20.18■□□□□ 0.82
NUP50-218ENST00000493456 CCDC69A6NI79 296 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 FSCN2O14926 492 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 RPS6KA5O75582 802 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 NUBP1P53384 320 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 TMEM184AQ6ZMB5 413 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 SLC24A5Q71RS6 500 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 THNSL1Q8IYQ7 743 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 RASGRP4Q8TDF6 673 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
NUP50-218ENST00000493456 ZFHX2Q9C0A1 2572 aaPredicted RBP20.17■□□□□ 0.82
NUP50-218ENST00000493456 SGSM2O43147 1006 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 PRC1O43663 620 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 MGEA5O60502 916 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 GFRA3O60609 400 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 LAG3P18627 525 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 IBSPP21815 317 aaPredicted RBP20.17■□□□□ 0.82
NUP50-218ENST00000493456 VCPP55072 806 aaKnown RBP20.17■□□□□ 0.82
NUP50-218ENST00000493456 COLGALT1Q8NBJ5 622 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 TMEM87BQ96K49 555 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 ADAM2Q99965 735 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 TMEM260Q9NX78 707 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 GINS2Q9Y248 185 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 CACNA1HO95180 2353 aa20.17■□□□□ 0.82
NUP50-218ENST00000493456 C9IYK1 514 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 SH2B2O14492 632 aaPredicted RBP20.16■□□□□ 0.82
NUP50-218ENST00000493456 GPR182O15218 404 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 HBP1O60381 514 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 ATG7O95352 703 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 KLRC1P26715 233 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 AVPR2P30518 371 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 MCM5P33992 734 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 ERVFC1P60507 584 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 RBM10P98175 930 aaKnown RBP20.16■□□□□ 0.82
NUP50-218ENST00000493456 KCNC3Q14003 757 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 FAM102BQ5T8I3 360 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 ANKRD54Q6NXT1 300 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 CMTR1Q8N1G2 835 aaKnown RBP20.16■□□□□ 0.82
NUP50-218ENST00000493456 MAP4K1Q92918 833 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 S1PR5Q9H228 398 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 TYW1Q9NV66 732 aaKnown RBP20.16■□□□□ 0.82
NUP50-218ENST00000493456 NOC2LQ9Y3T9 749 aaKnown RBP20.16■□□□□ 0.82
NUP50-218ENST00000493456 COL1A2P08123 1366 aa20.16■□□□□ 0.82
NUP50-218ENST00000493456 IGKV6D-21A0A0A0MT36 114 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 HOXB8P17481 243 aaPredicted RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 TECP42680 631 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 LIFRP42702 1097 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 PLCB3Q01970 1234 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 ITGB3BPQ13352 177 aaPredicted RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 CEP55Q53EZ4 464 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 HEATR3Q7Z4Q2 680 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 ZBTB33Q86T24 672 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 CYP2W1Q8TAV3 490 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 MRPS27Q92552 414 aaKnown RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 ATOH1Q92858 354 aaPredicted RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 ELAC1Q9H777 363 aaKnown RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 ATP6V0A4Q9HBG4 840 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 AGO4Q9HCK5 861 aaKnown RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 NGRNQ9NPE2 291 aaKnown RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 FAM86C1Q9NVL1 165 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 TMEM161AQ9NX61 479 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 PUF60Q9UHX1 559 aaKnown RBP20.15■□□□□ 0.82
NUP50-218ENST00000493456 ST3GAL5Q9UNP4 418 aa20.15■□□□□ 0.82
NUP50-218ENST00000493456 RXRAP19793 462 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 PLPP4Q5VZY2 271 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 FAM160B1Q5W0V3 765 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 KIAA0319LQ8IZA0 1049 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 TMEM40Q8WWA1 233 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 CWH43Q9H720 699 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 NR2E1Q9Y466 385 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 RBM8AQ9Y5S9 174 aaKnown RBP20.14■□□□□ 0.81
NUP50-218ENST00000493456 SLC12A7Q9Y666 1083 aa20.14■□□□□ 0.81
NUP50-218ENST00000493456 hCG_1642624A0A1W2PR95 340 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 BACH1O14867 736 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 HOXA2O43364 376 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 FOSP01100 380 aaPredicted RBP20.13■□□□□ 0.81
NUP50-218ENST00000493456 ARP10275 920 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 PDE4AP27815 886 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 PPM1AP35813 382 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 FAM189BP81408 668 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 ZNF484Q5JVG2 852 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 PPP1R18Q6NYC8 613 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 SYCE2Q6PIF2 218 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 RIPOR3Q96MK2 946 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 TCF25Q9BQ70 676 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 ENTPD7Q9NQZ7 604 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 HCSTQ9UBK5 93 aa20.13■□□□□ 0.81
NUP50-218ENST00000493456 CRYBB1P53674 252 aaPredicted RBP20.12■□□□□ 0.81
NUP50-218ENST00000493456 ABHD15Q6UXT9 468 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 NIPA1Q7RTP0 329 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 UBALD2Q8IYN6 164 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 CCDC82Q8N4S0 544 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 FANCBQ8NB91 859 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 TMEM117Q9H0C3 514 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 CDHR5Q9HBB8 845 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 RIC8AQ9NPQ8 531 aa20.12■□□□□ 0.81
NUP50-218ENST00000493456 PROB1E7EW31 1015 aa20.11■□□□□ 0.81
NUP50-218ENST00000493456 MEIS1O00470 390 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms