RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 BANK1Q8NDB2 785 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 NEK9Q8TD19 979 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 SEPT8Q92599 483 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 MTMR9Q96QG7 549 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 TTC12Q9H892 705 aaPredicted RBP11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 SEPT9Q9UHD8 586 aaPredicted RBP11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 PCDHA12Q9UN75 941 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 TRPV2Q9Y5S1 764 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 SQORQ9Y6N5 450 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 ARID2Q68CP9 1835 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 K7ELQ4 463 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 CHRNA1P02708 482 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 ATP2B1P20020 1258 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 DNAJB2P25686 324 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 TMOD1P28289 359 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 FBXO47Q5MNV8 452 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 ZNF697Q5TEC3 545 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 TSHZ1Q6ZSZ6 1077 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 FAM43BQ6ZT52 329 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 USP38Q8NB14 1042 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 DBF4BQ8NFT6 615 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 SNX21Q969T3 373 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 ZBTB10Q96DT7 871 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 INTS4Q96HW7 963 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 LXNQ9BS40 222 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 NIFKQ9BYG3 293 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 PBX4Q9BYU1 374 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 IFIH1Q9BYX4 1025 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 MSRAQ9UJ68 235 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 PPME1Q9Y570 386 aa11.96□□□□□ -0.49
CDC42SE1-206ENST00000492796 STBD1O95210 358 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 OR52Z1P0C646 297 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 GHRP10912 638 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 PDCP20941 246 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 TXKP42681 527 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 TBC1D8BQ0IIM8 1120 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 TARBP2Q15633 366 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 RILPL1Q5EBL4 403 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 LARP1BQ659C4 914 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 MCTP1Q6DN14 999 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 TRMT1LQ7Z2T5 733 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 C4orf19Q8IY42 314 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 KIAA0319LQ8IZA0 1049 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 METTL13Q8N6R0 699 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 LINC01465Q8N7H1 131 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 TIFAQ96CG3 184 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 MAP7D2Q96T17 732 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 CELF4Q9BZC1 486 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 TMEM60Q9H2L4 133 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 ZSWIM4Q9H7M6 989 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 PCDHA11Q9Y5I1 949 aa11.95□□□□□ -0.5
CDC42SE1-206ENST00000492796 EVPLQ92817 2033 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 GRXCR1A8MXD5 290 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 LAD1O00515 517 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 LYPLA2O95372 231 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 AMHP03971 560 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 TMEM62Q0P6H9 643 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 LPIN1Q14693 890 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 ZNF174Q15697 407 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 TMEM266Q2M3C6 531 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 TCTN1Q2MV58 587 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 MTERF2Q49AM1 385 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 EFCAB12Q6NXP0 572 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 ANO5Q75V66 913 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 EXOC8Q8IYI6 725 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 DEFB123Q8N688 67 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 ERMNQ8TAM6 284 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 JPH2Q9BR39 696 aaPredicted RBP11.94□□□□□ -0.5
CDC42SE1-206ENST00000492796 SZT2Q5T011 3432 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 IGKV6-21A0A0C4DH24 114 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 POTEMA6NI47 508 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 SLITRK3O94933 977 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 YWHABP31946 246 aaKnown RBP11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 PBX2P40425 430 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 TOB1P50616 345 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 CLCN3P51790 818 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 DEFB103AP81534 67 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 CDC42EP1Q00587 391 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 CYP4A11Q02928 519 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 PAK2Q13177 524 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 ODR4Q5SWX8 454 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 OTUD6AQ7L8S5 288 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 BRAPQ7Z569 592 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 HSCBQ8IWL3 235 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 CEP89Q96ST8 783 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 HSD17B14Q9BPX1 270 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 FTHL17Q9BXU8 183 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 OSBPL7Q9BZF2 842 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 CYP26B1Q9NR63 512 aa11.93□□□□□ -0.5
CDC42SE1-206ENST00000492796 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms