RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 KDM3AQ9Y4C1 1321 aa17■□□□□ 0.31
USP39-217ENST00000491659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17■□□□□ 0.31
USP39-217ENST00000491659 ZBTB42B2RXF5 422 aa17■□□□□ 0.31
USP39-217ENST00000491659 ARHGEF15O94989 841 aa17■□□□□ 0.31
USP39-217ENST00000491659 UPP2O95045 317 aa17■□□□□ 0.31
USP39-217ENST00000491659 MMP1P03956 469 aa17■□□□□ 0.31
USP39-217ENST00000491659 ST3GAL1Q11201 340 aa17■□□□□ 0.31
USP39-217ENST00000491659 PAK2Q13177 524 aa17■□□□□ 0.31
USP39-217ENST00000491659 NR5A1Q13285 461 aa17■□□□□ 0.31
USP39-217ENST00000491659 ADGRE1Q14246 886 aa17■□□□□ 0.31
USP39-217ENST00000491659 RALGAPA2Q2PPJ7 1873 aa17■□□□□ 0.31
USP39-217ENST00000491659 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
USP39-217ENST00000491659 TOP1MTQ969P6 601 aa17■□□□□ 0.31
USP39-217ENST00000491659 ZSCAN31Q96LW9 406 aaPredicted RBP17■□□□□ 0.31
USP39-217ENST00000491659 UPF2Q9HAU5 1272 aaKnown RBP17■□□□□ 0.31
USP39-217ENST00000491659 MAGEB2O15479 319 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 MARCH6O60337 910 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 CD52P31358 61 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 HTRA4P83105 476 aaPredicted RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 UGCGQ16739 394 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 KRT40Q6A162 431 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 DIS3L2Q8IYB7 885 aaKnown RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 METTL13Q8N6R0 699 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 FAM20AQ96MK3 541 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 MAP7D2Q96T17 732 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 YME1L1Q96TA2 773 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 KIF2CQ99661 725 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 LLPHQ9BRT6 129 aaKnown RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 FTHL17Q9BXU8 183 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 AGO3Q9H9G7 860 aaKnown RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 KCNMB3Q9NPA1 279 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 SH2B1Q9NRF2 756 aaPredicted RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 SEPT9Q9UHD8 586 aaPredicted RBP16.99■□□□□ 0.31
USP39-217ENST00000491659 GINS2Q9Y248 185 aa16.99■□□□□ 0.31
USP39-217ENST00000491659 LINC01553A4QN01 128 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 TBX3O15119 743 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 ZNF862O60290 1169 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 TMOD1P28289 359 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 SAFBQ15424 915 aaKnown RBP eCLIP16.98■□□□□ 0.31
USP39-217ENST00000491659 EARS2Q5JPH6 523 aaKnown RBP16.98■□□□□ 0.31
USP39-217ENST00000491659 ODR4Q5SWX8 454 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 B3GNT9Q6UX72 402 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 KIAA0319LQ8IZA0 1049 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 PPM1EQ8WY54 764 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 TNFRSF25Q93038 417 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 TGS1Q96RS0 853 aaKnown RBP16.98■□□□□ 0.31
USP39-217ENST00000491659 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
USP39-217ENST00000491659 EPOPA6NHQ4 379 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 BAG4O95429 457 aaKnown RBP16.97■□□□□ 0.31
USP39-217ENST00000491659 HMGN5P82970 282 aaKnown RBP16.97■□□□□ 0.31
USP39-217ENST00000491659 TBC1D8BQ0IIM8 1120 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 PPP2R5CQ13362 524 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 RABEP1Q15276 862 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 SLFN12Q8IYM2 578 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 SP7Q8TDD2 431 aaPredicted RBP16.97■□□□□ 0.31
USP39-217ENST00000491659 VAV3Q9UKW4 847 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 MTUS1Q9ULD2 1270 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 PADI3Q9ULW8 664 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 AKT3Q9Y243 479 aa16.97■□□□□ 0.31
USP39-217ENST00000491659 ARID2Q68CP9 1835 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 RFXAPO00287 272 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 ST18O60284 1047 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 DKC1O60832 514 aaKnown RBP eCLIP16.96■□□□□ 0.31
USP39-217ENST00000491659 RPS6KA5O75582 802 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 VTNP04004 478 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 CLCN3P51790 818 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 ERVK-21P61565 698 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 PSMC5P62195 406 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 CCDC85BQ15834 202 aaPredicted RBP16.96■□□□□ 0.31
USP39-217ENST00000491659 XKR3Q5GH77 459 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 EFCAB12Q6NXP0 572 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 SPRED2Q7Z698 418 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 BANK1Q8NDB2 785 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 C8orf76Q96K31 380 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 PPP1R16BQ96T49 567 aa16.96■□□□□ 0.31
USP39-217ENST00000491659 TTC3P53804 2025 aa16.96■□□□□ 0.3
USP39-217ENST00000491659 CHD7Q9P2D1 2997 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 ENPP3O14638 875 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 CRYBB1P53674 252 aaPredicted RBP16.95■□□□□ 0.3
USP39-217ENST00000491659 GUCY1B3Q02153 619 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 NFX1Q12986 1120 aaKnown RBP16.95■□□□□ 0.3
USP39-217ENST00000491659 GRB10Q13322 594 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 MTERF2Q49AM1 385 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 FAM43BQ6ZT52 329 aaPredicted RBP16.95■□□□□ 0.3
USP39-217ENST00000491659 ZNF710Q8N1W2 664 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 LRRC71Q8N4P6 559 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 FAM184AQ8NB25 1140 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 GDPD5Q8WTR4 605 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 LINC01599Q8WXQ3 324 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 SAMD11Q96NU1 681 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 OSMRQ99650 979 aa16.95■□□□□ 0.3
USP39-217ENST00000491659 ADGRA3Q8IWK6 1321 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms