RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CDC6Q99741 560 aa6.45□□□□□ -1.38
PHC3-213ENST00000491258 BTBD2Q9BX70 525 aa6.45□□□□□ -1.38
PHC3-213ENST00000491258 AMNQ9BXJ7 453 aa6.45□□□□□ -1.38
PHC3-213ENST00000491258 NELFAQ9H3P2 528 aa6.45□□□□□ -1.38
PHC3-213ENST00000491258 MSL2Q9HCI7 577 aa6.45□□□□□ -1.38
PHC3-213ENST00000491258 BTBD7Q9P203 1132 aa6.45□□□□□ -1.38
PHC3-213ENST00000491258 Q9UFV3 132 aa6.45□□□□□ -1.38
PHC3-213ENST00000491258 REXO2Q9Y3B8 237 aaKnown RBP6.45□□□□□ -1.38
PHC3-213ENST00000491258 CAPN14A8MX76 684 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 WNT9AO14904 365 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 ECE1P42892 770 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 DNM2P50570 870 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 HERVK_113P62684 666 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 TRIM68Q6AZZ1 485 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 TRIM55Q9BYV6 548 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 AURKAIP1Q9NWT8 199 aaPredicted RBP6.44□□□□□ -1.38
PHC3-213ENST00000491258 GIT1Q9Y2X7 761 aa6.44□□□□□ -1.38
PHC3-213ENST00000491258 CLASP2O75122 1294 aaKnown RBP6.43□□□□□ -1.38
PHC3-213ENST00000491258 MPIG6BO95866 241 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 MAKP20794 623 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 STAT5BP51692 787 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 SUMO1P63165 101 aaKnown RBP6.43□□□□□ -1.38
PHC3-213ENST00000491258 MOGSQ13724 837 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 RAB33AQ14088 237 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 SCUBE1Q8IWY4 988 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 SHCBP1Q8NEM2 672 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 LARP4BQ92615 738 aaKnown RBP6.43□□□□□ -1.38
PHC3-213ENST00000491258 IPO9Q96P70 1041 aaKnown RBP6.43□□□□□ -1.38
PHC3-213ENST00000491258 OR10A5Q9H207 317 aa6.43□□□□□ -1.38
PHC3-213ENST00000491258 TRBV23-1A0A0A0MS06 115 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 CCDC66A2RUB6 948 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 ARVCFO00192 962 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 GSTA4O15217 222 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 MMEP08473 750 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 NANOS3P60323 173 aaKnown RBP6.42□□□□□ -1.38
PHC3-213ENST00000491258 CRHR2Q13324 411 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 KANK2Q63ZY3 851 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 TMEM200BQ69YZ2 307 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 SPATC1Q76KD6 591 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 ADGRE4PQ86SQ3 457 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 LDLRAD3Q86YD5 345 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 THEMISQ8N1K5 641 aaPredicted RBP6.42□□□□□ -1.38
PHC3-213ENST00000491258 CLIP3Q96DZ5 547 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 SMURF1Q9HCE7 757 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 PCDHA9Q9Y5H5 950 aa6.42□□□□□ -1.38
PHC3-213ENST00000491258 CYP27B1O15528 508 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 SLC26A4O43511 780 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 NAT1P18440 290 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 FAM209AQ5JX71 171 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 GRAMD4Q6IC98 578 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 ZNF575Q86XF7 245 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 ZC3H7AQ8IWR0 971 aaKnown RBP6.41□□□□□ -1.38
PHC3-213ENST00000491258 DNAJC10Q8IXB1 793 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 CISD2Q8N5K1 135 aaKnown RBP6.41□□□□□ -1.38
PHC3-213ENST00000491258 ZNF669Q96BR6 464 aaPredicted RBP6.41□□□□□ -1.38
PHC3-213ENST00000491258 CEP72Q9P209 647 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 PFDN2Q9UHV9 154 aa6.41□□□□□ -1.38
PHC3-213ENST00000491258 PRAMEF22A3QJZ6 481 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 SCDO00767 359 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 C6orf222P0C671 652 aaPredicted RBP6.4□□□□□ -1.38
PHC3-213ENST00000491258 HGFACQ04756 655 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 SEC23AQ15436 765 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 ZNF627Q7L945 461 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 MRGPRGQ86SM5 289 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 TMPRSS6Q8IU80 811 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 SLC43A3Q8NBI5 491 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 HIPK4Q8NE63 616 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 ZG16BQ96DA0 208 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 ZNF703Q9H7S9 590 aaPredicted RBP6.4□□□□□ -1.38
PHC3-213ENST00000491258 AGO3Q9H9G7 860 aaKnown RBP6.4□□□□□ -1.38
PHC3-213ENST00000491258 SLC2A4RGQ9NR83 387 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 PARPBPQ9NWS1 579 aa6.4□□□□□ -1.38
PHC3-213ENST00000491258 HECAQ9UBI9 543 aaPredicted RBP6.4□□□□□ -1.38
PHC3-213ENST00000491258 ADCY3O60266 1144 aa6.39□□□□□ -1.39
PHC3-213ENST00000491258 PPFIA2O75334 1257 aa6.39□□□□□ -1.39
PHC3-213ENST00000491258 RIN1Q13671 783 aa6.39□□□□□ -1.39
PHC3-213ENST00000491258 FOXB2Q5VYV0 432 aa6.39□□□□□ -1.39
PHC3-213ENST00000491258 ASB15Q8WXK1 588 aa6.39□□□□□ -1.39
PHC3-213ENST00000491258 GMLQ99445 158 aa6.39□□□□□ -1.39
PHC3-213ENST00000491258 A0A1W2PRX2 142 aa6.38□□□□□ -1.39
PHC3-213ENST00000491258 PDPK1O15530 556 aa6.38□□□□□ -1.39
PHC3-213ENST00000491258 CRTAMO95727 393 aa6.38□□□□□ -1.39
PHC3-213ENST00000491258 GABREP78334 506 aa6.38□□□□□ -1.39
PHC3-213ENST00000491258 SSRP1Q08945 709 aaKnown RBP6.38□□□□□ -1.39
PHC3-213ENST00000491258 RRP1BQ14684 758 aaKnown RBP6.38□□□□□ -1.39
PHC3-213ENST00000491258 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
PHC3-213ENST00000491258 MTERF2Q49AM1 385 aa6.38□□□□□ -1.39
PHC3-213ENST00000491258 SPTY2D1Q68D10 685 aaPredicted RBP6.38□□□□□ -1.39
PHC3-213ENST00000491258 GBP4Q96PP9 640 aa6.38□□□□□ -1.39
PHC3-213ENST00000491258 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 CCDC85CA6NKD9 419 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 FOXP2O15409 715 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 RAMP2O60895 175 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 STAT3P40763 770 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 LACTBP83111 547 aaPredicted RBP6.37□□□□□ -1.39
PHC3-213ENST00000491258 ADAM15Q13444 863 aa6.37□□□□□ -1.39
PHC3-213ENST00000491258 TM4SF20Q53R12 229 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms