RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 FAM205CA6NFA0 338 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 ZNF862O60290 1169 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 UPP2O95045 317 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 CD52P31358 61 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 NR5A1Q13285 461 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 EARS2Q5JPH6 523 aaKnown RBP20.02■□□□□ 0.8
ITGB1-215ENST00000488494 MIER3Q7Z3K6 550 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 YME1L1Q96TA2 773 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 CELF4Q9BZC1 486 aaKnown RBP20.02■□□□□ 0.8
ITGB1-215ENST00000488494 BRMS1Q9HCU9 246 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 INSL6Q9Y581 213 aa20.02■□□□□ 0.8
ITGB1-215ENST00000488494 GCFC2P16383 781 aaKnown RBP20.01■□□□□ 0.79
ITGB1-215ENST00000488494 HTRA4P83105 476 aaPredicted RBP20.01■□□□□ 0.79
ITGB1-215ENST00000488494 PAK2Q13177 524 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 KIAA0319LQ8IZA0 1049 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 NME8Q8N427 588 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 RDM1Q8NG50 284 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 GDPD5Q8WTR4 605 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 PPP1R16BQ96T49 567 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 KIF2CQ99661 725 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 GINS2Q9Y248 185 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 MYH9P35579 1960 aaKnown RBP20.01■□□□□ 0.79
ITGB1-215ENST00000488494 KDM3AQ9Y4C1 1321 aa20.01■□□□□ 0.79
ITGB1-215ENST00000488494 WDR81Q562E7 1941 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 CCNT1O60563 726 aaKnown RBP20■□□□□ 0.79
ITGB1-215ENST00000488494 TRIM29Q14134 588 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 CCDC85BQ15834 202 aaPredicted RBP20■□□□□ 0.79
ITGB1-215ENST00000488494 CCDC83Q8IWF9 413 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 METTL13Q8N6R0 699 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 SP7Q8TDD2 431 aaPredicted RBP20■□□□□ 0.79
ITGB1-215ENST00000488494 LINC01599Q8WXQ3 324 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 TNFRSF25Q93038 417 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 TOP1MTQ969P6 601 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 TGS1Q96RS0 853 aaKnown RBP20■□□□□ 0.79
ITGB1-215ENST00000488494 VAV3Q9UKW4 847 aa20■□□□□ 0.79
ITGB1-215ENST00000488494 MMP1P03956 469 aa19.99■□□□□ 0.79
ITGB1-215ENST00000488494 CLCN3P51790 818 aa19.99■□□□□ 0.79
ITGB1-215ENST00000488494 TMEM266Q2M3C6 531 aa19.99■□□□□ 0.79
ITGB1-215ENST00000488494 PPP4R3AQ6IN85 833 aa19.99■□□□□ 0.79
ITGB1-215ENST00000488494 B3GNT9Q6UX72 402 aa19.99■□□□□ 0.79
ITGB1-215ENST00000488494 NAP1L4Q99733 375 aaKnown RBP19.99■□□□□ 0.79
ITGB1-215ENST00000488494 KCNMB3Q9NPA1 279 aa19.99■□□□□ 0.79
ITGB1-215ENST00000488494 SEPT9Q9UHD8 586 aaPredicted RBP19.99■□□□□ 0.79
ITGB1-215ENST00000488494 SQORQ9Y6N5 450 aa19.99■□□□□ 0.79
ITGB1-215ENST00000488494 GTPBP6O43824 516 aaPredicted RBP19.98■□□□□ 0.79
ITGB1-215ENST00000488494 VTNP04004 478 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 ERVK-21P61565 698 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 GRB10Q13322 594 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 KIZQ2M2Z5 673 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 KRT40Q6A162 431 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 POTEDQ86YR6 584 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 DIS3L2Q8IYB7 885 aaKnown RBP19.98■□□□□ 0.79
ITGB1-215ENST00000488494 LRRC71Q8N4P6 559 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 C17orf80Q9BSJ5 609 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 PRDM6Q9NQX0 595 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 NRBP2Q9NSY0 501 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 PADI3Q9ULW8 664 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
ITGB1-215ENST00000488494 TMEM150BA6NC51 233 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 RBM25P49756 843 aaKnown RBP19.97■□□□□ 0.79
ITGB1-215ENST00000488494 PPP2R5CQ13362 524 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 BANK1Q8NDB2 785 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 TMEM40Q8WWA1 233 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 FAM20AQ96MK3 541 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 OSMRQ99650 979 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 CDHR5Q9HBB8 845 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 LOXHD1Q8IVV2 1947 aa19.97■□□□□ 0.79
ITGB1-215ENST00000488494 MYO9BQ13459 2157 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 BTBD18B2RXH4 712 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 EML1O00423 815 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 ENPP3O14638 875 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 MAGEB2O15479 319 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 LPXNO60711 386 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 LINC01465Q8N7H1 131 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 MAP7D2Q96T17 732 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 FTHL17Q9BXU8 183 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 TMX1Q9H3N1 280 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 ERVK-5Q9HDB9 667 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 AKT3Q9Y243 479 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 NOC2LQ9Y3T9 749 aaKnown RBP19.96■□□□□ 0.79
ITGB1-215ENST00000488494 ADGRA3Q8IWK6 1321 aa19.96■□□□□ 0.79
ITGB1-215ENST00000488494 VCANP13611 3396 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 TBX3O15119 743 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 MARCH6O60337 910 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 GUCY1B3Q02153 619 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 TBC1D8BQ0IIM8 1120 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 NFX1Q12986 1120 aaKnown RBP19.95■□□□□ 0.78
ITGB1-215ENST00000488494 MTERF2Q49AM1 385 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 XKR3Q5GH77 459 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 EFCAB12Q6NXP0 572 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 FBXO22Q8NEZ5 403 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 HAS1Q92839 578 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 ZSCAN31Q96LW9 406 aaPredicted RBP19.95■□□□□ 0.78
ITGB1-215ENST00000488494 TSPYL2Q9H2G4 693 aaPredicted RBP19.95■□□□□ 0.78
ITGB1-215ENST00000488494 SUGCTQ9HAC7 445 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 SH2B1Q9NRF2 756 aaPredicted RBP19.95■□□□□ 0.78
ITGB1-215ENST00000488494 THEGQ9P2T0 379 aa19.95■□□□□ 0.78
ITGB1-215ENST00000488494 CUL9Q8IWT3 2517 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms