RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RTF1Q92541 710 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 C16orf92Q96LL3 132 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 TUBGCP5Q96RT8 1024 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 GPR39O43194 453 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 APOL3O95236 402 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 MPIG6BO95866 241 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 CDK11BP21127 795 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 ECE1P42892 770 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 CDKN1CP49918 316 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 PHC1P78364 1004 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 ROM1Q03395 351 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 FAM50AQ14320 339 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 TTC38Q5R3I4 469 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 PRAMEF9Q5VWM5 478 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 TRMT10BQ6PF06 316 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 LRSAM1Q6UWE0 723 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 DPP8Q6V1X1 898 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 SAPCD2Q86UD0 394 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 RTN4RL1Q86UN2 441 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 SPATS2Q86XZ4 545 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 PHYKPLQ8IUZ5 450 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 ZNF526Q8TF50 670 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 DACT3Q96B18 629 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 BRINP2Q9C0B6 783 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 ZMAT4Q9H898 229 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 NTMQ9P121 344 aa5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 NOC2LQ9Y3T9 749 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-217ENST00000488087 RPL13P26373 211 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 SESN3P58005 492 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 EVA1CP58658 441 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 SLC6A3Q01959 620 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 ALDH6A1Q02252 535 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 LRRC32Q14392 662 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 RTP5Q14D33 572 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 TERF2Q15554 542 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 VMACQ2NL98 169 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 WDR72Q3MJ13 1102 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 TCERG1LQ5VWI1 586 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 TIGD7Q6NT04 549 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 ADGRG2Q8IZP9 1017 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 PRPF38AQ8NAV1 312 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 FOXRED1Q96CU9 486 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 TOX2Q96NM4 488 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 FOXB1Q99853 325 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 BTBD2Q9BX70 525 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 AMNQ9BXJ7 453 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 MS4A5Q9H3V2 200 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 POFUT1Q9H488 388 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 L2HGDHQ9H9P8 463 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 KCND1Q9NSA2 647 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 SPATA6Q9NWH7 488 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 MSRAQ9UJ68 235 aa5.31□□□□□ -1.56
ECHDC1-217ENST00000488087 A0A1B0GTL3 188 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 DDX3XO00571 662 aaKnown RBP eCLIP5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 KDM1AO60341 852 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 IL18BPO95998 194 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 PRLP01236 227 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 IL13P35225 146 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 SARSP49591 514 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 RGS3P49796 1198 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 GUCY2FP51841 1108 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 IL13RA1P78552 427 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 VWA3BQ502W6 1294 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 GPR158Q5T848 1215 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 SLFN12LQ6IEE8 588 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 CLRN3Q8NCR9 226 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 COG1Q8WTW3 980 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 MAML3Q96JK9 1138 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 OR10A5Q9H207 317 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 SLC5A4Q9NY91 659 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 USP36Q9P275 1121 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 FTSJ1Q9UET6 329 aa5.3□□□□□ -1.56
ECHDC1-217ENST00000488087 TTBK1Q5TCY1 1321 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 LCHNA4D1U4 455 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ALG1L2C9J202 215 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 H0Y858 1186 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 FFAR3O14843 346 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 PRPF6O94906 941 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 CYP1A1P04798 512 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 HSP90B1P14625 803 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 APEX1P27695 318 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ADCY8P40145 1251 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 MLLT6P55198 1093 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 CAP1Q01518 475 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 FAPQ12884 760 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 FRMD7Q6ZUT3 714 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ESPNLQ6ZVH7 1005 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 OTOP2Q7RTS6 562 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 RASSF3Q86WH2 238 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 LRRC56Q8IYG6 542 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ANKRD13AQ8IZ07 590 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ZCCHC14Q8WYQ9 949 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 RPGRQ92834 1020 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 FERMT2Q96AC1 680 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ZNF496Q96IT1 587 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 MYL10Q9BUA6 226 aa5.29□□□□□ -1.56
ECHDC1-217ENST00000488087 ZDHHC5Q9C0B5 715 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms