RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 COL4A3Q01955 1670 aa18.76■□□□□ 0.59
TOM1-214ENST00000487670 MAP1BP46821 2468 aaKnown RBP18.75■□□□□ 0.59
TOM1-214ENST00000487670 PDE4AP27815 886 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 PLCB4Q15147 1175 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 IER5Q5VY09 327 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 MRPS27Q92552 414 aaKnown RBP18.75■□□□□ 0.59
TOM1-214ENST00000487670 ADAM2Q99965 735 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 AAASQ9NRG9 546 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 GINS2Q9Y248 185 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 NR2E1Q9Y466 385 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 PCDHB7Q9Y5E2 793 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 SQORQ9Y6N5 450 aa18.75■□□□□ 0.59
TOM1-214ENST00000487670 PNMA6FA0A0J9YX94 578 aa18.74■□□□□ 0.59
TOM1-214ENST00000487670 C9IYK1 514 aa18.74■□□□□ 0.59
TOM1-214ENST00000487670 RARS2Q5T160 578 aaKnown RBP18.74■□□□□ 0.59
TOM1-214ENST00000487670 MCTP2Q6DN12 878 aa18.74■□□□□ 0.59
TOM1-214ENST00000487670 CWC27Q6UX04 472 aaKnown RBP18.74■□□□□ 0.59
TOM1-214ENST00000487670 PATJQ8NI35 1801 aa18.73■□□□□ 0.59
TOM1-214ENST00000487670 ANGPT1Q15389 498 aa18.73■□□□□ 0.59
TOM1-214ENST00000487670 MFSD1Q9H3U5 465 aa18.73■□□□□ 0.59
TOM1-214ENST00000487670 SMARCAD1Q9H4L7 1026 aa18.73■□□□□ 0.59
TOM1-214ENST00000487670 PCDHA2Q9Y5H9 948 aa18.73■□□□□ 0.59
TOM1-214ENST00000487670 TAF6LQ9Y6J9 622 aa18.73■□□□□ 0.59
TOM1-214ENST00000487670 KDM3AQ9Y4C1 1321 aa18.73■□□□□ 0.59
TOM1-214ENST00000487670 KRT76Q01546 638 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 UBE2SQ16763 222 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 CCDC105Q8IYK2 499 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 KIAA2013Q8IYS2 634 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 SMARCC2Q8TAQ2 1214 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 GPRASP2Q96D09 838 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 ADAM7Q9H2U9 754 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 RGS18Q9NS28 235 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 R4GN57 208 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 ACACBO00763 2458 aa18.72■□□□□ 0.59
TOM1-214ENST00000487670 MYH15Q9Y2K3 1946 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 M0QZ92 97 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 CLASP2O75122 1294 aaKnown RBP18.71■□□□□ 0.59
TOM1-214ENST00000487670 SRGAP2BP0DMP2 458 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 HOXB8P17481 243 aaPredicted RBP18.71■□□□□ 0.59
TOM1-214ENST00000487670 CLCN5P51795 746 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 PLCB3Q01970 1234 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 NLRX1Q86UT6 975 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 FAM228AQ86W67 206 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 AUTS2Q8WXX7 1259 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 CNTNAP3BQ96NU0 1288 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 CASD1Q96PB1 797 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 CNTNAP3Q9BZ76 1288 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 KRT23Q9C075 422 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 ST3GAL5Q9UNP4 418 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 LZTS1Q9Y250 596 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 UBIAD1Q9Y5Z9 338 aa18.71■□□□□ 0.59
TOM1-214ENST00000487670 GPR179Q6PRD1 2367 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 DENND3A2RUS2 1198 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 C2orf71A6NGG8 1288 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 RRN3P2A6NIE6 340 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 LAG3P18627 525 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 AOC1P19801 751 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 TROAPQ12815 778 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 PDE12Q6L8Q7 609 aaKnown RBP18.7■□□□□ 0.58
TOM1-214ENST00000487670 MTHFD1LQ6UB35 978 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 KCNT2Q6UVM3 1135 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 DGLUCYQ7Z3D6 616 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 TDRD5Q8NAT2 981 aaKnown RBP18.7■□□□□ 0.58
TOM1-214ENST00000487670 CASP10Q92851 521 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 LNPKQ9C0E8 428 aa18.7■□□□□ 0.58
TOM1-214ENST00000487670 SMIM35A0A1B0GVV1 85 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 FSD2A1L4K1 749 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 RPS6KA5O75582 802 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 EPCAMP16422 314 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 DSC3Q14574 896 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 IMMTQ16891 758 aaKnown RBP18.69■□□□□ 0.58
TOM1-214ENST00000487670 TMC7Q7Z402 723 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 DTWD2Q8NBA8 298 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 GIMAP8Q8ND71 665 aaPredicted RBP18.69■□□□□ 0.58
TOM1-214ENST00000487670 MYL10Q9BUA6 226 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 DSCC1Q9BVC3 393 aa18.69■□□□□ 0.58
TOM1-214ENST00000487670 NT5C1B-RDH14C9J2C7 533 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 NARSO43776 548 aaKnown RBP18.68■□□□□ 0.58
TOM1-214ENST00000487670 MFAP1P55081 439 aaKnown RBP18.68■□□□□ 0.58
TOM1-214ENST00000487670 MTMR1Q13613 665 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 TPRNQ4KMQ1 711 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 CES5AQ6NT32 575 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 SLC24A5Q71RS6 500 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
TOM1-214ENST00000487670 ZDHHC14Q8IZN3 488 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 DCLK2Q8N568 766 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 CYP2W1Q8TAV3 490 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 RIN2Q8WYP3 895 aaPredicted RBP18.68■□□□□ 0.58
TOM1-214ENST00000487670 OSMRQ99650 979 aa18.68■□□□□ 0.58
TOM1-214ENST00000487670 MTCL1Q9Y4B5 1905 aaKnown RBP18.68■□□□□ 0.58
TOM1-214ENST00000487670 PIK3CDO00329 1044 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 KLRC1P26715 233 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 ITIH3Q06033 890 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 KIZQ2M2Z5 673 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 CLLU1OSQ5K130 101 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 KIAA1841Q6NSI8 718 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 KIAA0319LQ8IZA0 1049 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 CMTR1Q8N1G2 835 aaKnown RBP18.67■□□□□ 0.58
TOM1-214ENST00000487670 NECTIN4Q96NY8 510 aa18.67■□□□□ 0.58
TOM1-214ENST00000487670 CNNM2Q9H8M5 875 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms