RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PRDM6Q9NQX0 595 aa19.91■□□□□ 0.78
COL6A1-204ENST00000486023 ENPP3O14638 875 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 GTPBP6O43824 516 aaPredicted RBP19.9■□□□□ 0.78
COL6A1-204ENST00000486023 OATP04181 439 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 RPLP2P05387 115 aaKnown RBP19.9■□□□□ 0.78
COL6A1-204ENST00000486023 SFNP31947 248 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 PRKCEQ02156 737 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 PAK2Q13177 524 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 SKIV2LQ15477 1246 aaKnown RBP19.9■□□□□ 0.78
COL6A1-204ENST00000486023 KRT40Q6A162 431 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 SUGCTQ9HAC7 445 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 CDHR5Q9HBB8 845 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 PADI3Q9ULW8 664 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 COL1A2P08123 1366 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 GBF1Q92538 1859 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 KAT6AQ92794 2004 aa19.9■□□□□ 0.78
COL6A1-204ENST00000486023 LINC01553A4QN01 128 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 ZBTB42B2RXF5 422 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 DLL1O00548 723 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 ZNF862O60290 1169 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 VTNP04004 478 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 KIZQ2M2Z5 673 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 MOXD1Q6UVY6 613 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 LRRC71Q8N4P6 559 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 BANK1Q8NDB2 785 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 ETNPPLQ8TBG4 499 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 ZNF668Q96K58 619 aaPredicted RBP19.89■□□□□ 0.77
COL6A1-204ENST00000486023 FAM167AQ96KS9 214 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 SH2D3AQ9BRG2 576 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 SEPT9Q9UHD8 586 aaPredicted RBP19.89■□□□□ 0.77
COL6A1-204ENST00000486023 CEP131Q9UPN4 1083 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 AKT3Q9Y243 479 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 CHD7Q9P2D1 2997 aa19.89■□□□□ 0.77
COL6A1-204ENST00000486023 IGSF9BQ9UPX0 1349 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 DDX11L8A8MPP1 907 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 BTBD18B2RXH4 712 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 C22orf31O95567 290 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 ATP2B1P20020 1258 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 CLCN3P51790 818 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 ST3GAL1Q11201 340 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 GRB10Q13322 594 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 MKRN4PQ13434 485 aaPredicted RBP19.88■□□□□ 0.77
COL6A1-204ENST00000486023 EFCAB12Q6NXP0 572 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 DIS3L2Q8IYB7 885 aaKnown RBP19.88■□□□□ 0.77
COL6A1-204ENST00000486023 GDPD5Q8WTR4 605 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 MBOAT7Q96N66 472 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 TGS1Q96RS0 853 aaKnown RBP19.88■□□□□ 0.77
COL6A1-204ENST00000486023 C17orf80Q9BSJ5 609 aa19.88■□□□□ 0.77
COL6A1-204ENST00000486023 TMEM150BA6NC51 233 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 RPS6KA5O75582 802 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 MTERF2Q49AM1 385 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 PPP4R3AQ6IN85 833 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 OSMRQ99650 979 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 KIF2CQ99661 725 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 NOC2LQ9Y3T9 749 aaKnown RBP19.87■□□□□ 0.77
COL6A1-204ENST00000486023 UNC80Q8N2C7 3258 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 MYO9BQ13459 2157 aa19.87■□□□□ 0.77
COL6A1-204ENST00000486023 PRUNE2Q8WUY3 3088 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 EML1O00423 815 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 MAGEB2O15479 319 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 BAG4O95429 457 aaKnown RBP19.86■□□□□ 0.77
COL6A1-204ENST00000486023 MMP1P03956 469 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 TMOD1P28289 359 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 HTRA4P83105 476 aaPredicted RBP19.86■□□□□ 0.77
COL6A1-204ENST00000486023 TBC1D8BQ0IIM8 1120 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 NCAPH2Q6IBW4 605 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 SCLT1Q96NL6 688 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 MAP7D2Q96T17 732 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 NAP1L4Q99733 375 aaKnown RBP19.86■□□□□ 0.77
COL6A1-204ENST00000486023 MTCH2Q9Y6C9 303 aa19.86■□□□□ 0.77
COL6A1-204ENST00000486023 GCFC2P16383 781 aaKnown RBP19.85■□□□□ 0.77
COL6A1-204ENST00000486023 NLRP11P59045 1033 aaKnown RBP19.85■□□□□ 0.77
COL6A1-204ENST00000486023 ERVK-21P61565 698 aa19.85■□□□□ 0.77
COL6A1-204ENST00000486023 SAFBQ15424 915 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL6A1-204ENST00000486023 RTN4RL1Q86UN2 441 aaPredicted RBP19.85■□□□□ 0.77
COL6A1-204ENST00000486023 FAM184AQ8NB25 1140 aa19.85■□□□□ 0.77
COL6A1-204ENST00000486023 RDM1Q8NG50 284 aa19.85■□□□□ 0.77
COL6A1-204ENST00000486023 TMEM40Q8WWA1 233 aa19.85■□□□□ 0.77
COL6A1-204ENST00000486023 ZSCAN31Q96LW9 406 aaPredicted RBP19.85■□□□□ 0.77
COL6A1-204ENST00000486023 FAM20AQ96MK3 541 aa19.85■□□□□ 0.77
COL6A1-204ENST00000486023 FTHL17Q9BXU8 183 aa19.85■□□□□ 0.77
COL6A1-204ENST00000486023 UPF2Q9HAU5 1272 aaKnown RBP19.85■□□□□ 0.77
COL6A1-204ENST00000486023 XKR3Q5GH77 459 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 FIBCD1Q8N539 461 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 FBXO22Q8NEZ5 403 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 LINC01599Q8WXQ3 324 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 HAS1Q92839 578 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 TNFRSF25Q93038 417 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 C8orf76Q96K31 380 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 KCNMB3Q9NPA1 279 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 ST3GAL5Q9UNP4 418 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 SQORQ9Y6N5 450 aa19.84■□□□□ 0.77
COL6A1-204ENST00000486023 DENND3A2RUS2 1198 aa19.83■□□□□ 0.77
COL6A1-204ENST00000486023 CRYBB1P53674 252 aaPredicted RBP19.83■□□□□ 0.77
COL6A1-204ENST00000486023 PSMC5P62195 406 aa19.83■□□□□ 0.77
COL6A1-204ENST00000486023 GNL2Q13823 731 aaKnown RBP19.83■□□□□ 0.77
COL6A1-204ENST00000486023 B3GNT9Q6UX72 402 aa19.83■□□□□ 0.77
COL6A1-204ENST00000486023 TSPYL2Q9H2G4 693 aaPredicted RBP19.83■□□□□ 0.77
COL6A1-204ENST00000486023 TMX1Q9H3N1 280 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms