RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 FAM20AQ96MK3 541 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 TRPV2Q9Y5S1 764 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 CHD7Q9P2D1 2997 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 C22orf31O95567 290 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 AMHP03971 560 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 HMGN5P82970 282 aaKnown RBP20.74■□□□□ 0.91
COL1A1-206ENST00000485870 MKRN4PQ13434 485 aaPredicted RBP20.74■□□□□ 0.91
COL1A1-206ENST00000485870 SAFBQ15424 915 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL1A1-206ENST00000485870 APBB2Q92870 758 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 NRBP2Q9NSY0 501 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 CEP131Q9UPN4 1083 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 LOXHD1Q8IVV2 1947 aa20.74■□□□□ 0.91
COL1A1-206ENST00000485870 ARHGEF15O94989 841 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 GJB5O95377 273 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 TSHZ1Q6ZSZ6 1077 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 KIAA0319LQ8IZA0 1049 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 NME8Q8N427 588 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 METTL13Q8N6R0 699 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 HAS1Q92839 578 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 CELF4Q9BZC1 486 aaKnown RBP20.73■□□□□ 0.91
COL1A1-206ENST00000485870 VAV3Q9UKW4 847 aa20.73■□□□□ 0.91
COL1A1-206ENST00000485870 LCHNA4D1U4 455 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 EML1O00423 815 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 TBX3O15119 743 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 CD52P31358 61 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 PPP2R5CQ13362 524 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 BANK1Q8NDB2 785 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 PPP1R16BQ96T49 567 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 AGO3Q9H9G7 860 aaKnown RBP20.72■□□□□ 0.91
COL1A1-206ENST00000485870 CERS4Q9HA82 394 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 GINS2Q9Y248 185 aa20.72■□□□□ 0.91
COL1A1-206ENST00000485870 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-206ENST00000485870 WNT7AO00755 349 aa20.71■□□□□ 0.91
COL1A1-206ENST00000485870 CD2BP2O95400 341 aaKnown RBP20.71■□□□□ 0.91
COL1A1-206ENST00000485870 BAG4O95429 457 aaKnown RBP20.71■□□□□ 0.91
COL1A1-206ENST00000485870 CLCN3P51790 818 aa20.71■□□□□ 0.91
COL1A1-206ENST00000485870 TAP1Q03518 808 aa20.71■□□□□ 0.91
COL1A1-206ENST00000485870 MAFAQ8NHW3 353 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-206ENST00000485870 GAS2L1Q99501 681 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-206ENST00000485870 RAD9AQ99638 391 aa20.71■□□□□ 0.91
COL1A1-206ENST00000485870 SEPT9Q9UHD8 586 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-206ENST00000485870 EYSQ5T1H1 3165 aa20.71■□□□□ 0.91
COL1A1-206ENST00000485870 TMEM150BA6NC51 233 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 MAGEB2O15479 319 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 UPP2O95045 317 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 VTNP04004 478 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 ATP2B1P20020 1258 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 CALCRLQ16602 461 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 XKR3Q5GH77 459 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 NCAPH2Q6IBW4 605 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 SLFN12Q8IYM2 578 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 LRRC71Q8N4P6 559 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 FBXO18Q8NFZ0 1043 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 TMX3Q96JJ7 454 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 KDM3AQ9Y4C1 1321 aa20.7■□□□□ 0.9
COL1A1-206ENST00000485870 NEMFO60524 1076 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 PSMC5P62195 406 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 PAK2Q13177 524 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 GNL2Q13823 731 aaKnown RBP20.69■□□□□ 0.9
COL1A1-206ENST00000485870 KIZQ2M2Z5 673 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 TMEM266Q2M3C6 531 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 MTERF2Q49AM1 385 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 EFCAB12Q6NXP0 572 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 SPRED2Q7Z698 418 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 USP38Q8NB14 1042 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 SH2D3AQ9BRG2 576 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 CDHR5Q9HBB8 845 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 AKT3Q9Y243 479 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 SQORQ9Y6N5 450 aa20.69■□□□□ 0.9
COL1A1-206ENST00000485870 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 STBD1O95210 358 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 IGFBP4P22692 258 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 QARSP47897 775 aaKnown RBP20.68■□□□□ 0.9
COL1A1-206ENST00000485870 TBC1D8BQ0IIM8 1120 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 ADGRE1Q14246 886 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 ARNTL2Q8WYA1 636 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 TOP1MTQ969P6 601 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 MAP7D2Q96T17 732 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 FOXP1Q9H334 677 aaPredicted RBP20.68■□□□□ 0.9
COL1A1-206ENST00000485870 SUGCTQ9HAC7 445 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 PADI3Q9ULW8 664 aa20.68■□□□□ 0.9
COL1A1-206ENST00000485870 RFXAPO00287 272 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 P4HBP07237 508 aaKnown RBP20.67■□□□□ 0.9
COL1A1-206ENST00000485870 TMOD1P28289 359 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 MCM7P33993 719 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 SPIRE1Q08AE8 756 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 EPHA7Q15375 998 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 TARBP2Q15633 366 aaKnown RBP20.67■□□□□ 0.9
COL1A1-206ENST00000485870 PLA2G4FQ68DD2 849 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 LINC01465Q8N7H1 131 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 IL27Q8NEV9 243 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 TMEM40Q8WWA1 233 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 YME1L1Q96TA2 773 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 OSMRQ99650 979 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 NIFKQ9BYG3 293 aaKnown RBP20.67■□□□□ 0.9
COL1A1-206ENST00000485870 INSL6Q9Y581 213 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
COL1A1-206ENST00000485870 EPOPA6NHQ4 379 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 ENPP3O14638 875 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms