RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 ZNF274Q96GC6 653 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-207ENST00000483969 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.77
COL8A1-207ENST00000483969 ABHD16BQ9H3Z7 469 aa10.27□□□□□ -0.77
COL8A1-207ENST00000483969 GCOM1H8Y6P7 765 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 SEPT4O43236 478 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 SNAI1O95863 264 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 CFBP00751 764 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 POLR2MP0CAP2 368 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 CYBAP13498 195 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 PDIA3P30101 505 aaKnown RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 CCND3P30281 292 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 AFF1P51825 1210 aaKnown RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 RPS6P62753 249 aaKnown RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 AKAP17AQ02040 695 aaKnown RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 DPYDQ12882 1025 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 ACVR2BQ13705 512 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 SLC35G1Q2M3R5 365 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 CRTC2Q53ET0 693 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 CMTR1Q8N1G2 835 aaKnown RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 IL17RAQ96F46 866 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 DDX20Q9UHI6 824 aaKnown RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 DMGDHQ9UI17 866 aaKnown RBP10.26□□□□□ -0.77
COL8A1-207ENST00000483969 FAM184BQ9ULE4 1060 aa10.26□□□□□ -0.77
COL8A1-207ENST00000483969 PPP1R11O60927 126 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 RGS9O75916 674 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 MAP3K6O95382 1288 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 ZNF865P0CJ78 1059 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 NEK4P51957 841 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 TOB2Q14106 344 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 CPLX2Q6PUV4 134 aaKnown RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 ARMCX2Q7L311 632 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 FMR1NBQ8N0W7 255 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 ARRDC4Q8NCT1 418 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 SYTL5Q8TDW5 730 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 NSUN6Q8TEA1 469 aaKnown RBP10.25□□□□□ -0.77
COL8A1-207ENST00000483969 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 CUL5Q93034 780 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 C22orf23Q9BZE7 217 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 PPP1R12CQ9BZL4 782 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 C11orf16Q9NQ32 467 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 OGDHLQ9ULD0 1010 aa10.25□□□□□ -0.77
COL8A1-207ENST00000483969 hCG_1984214I3L0E3 225 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 CPLX1O14810 134 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 RARBP10826 455 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 AKR1A1P14550 325 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 CDC27P30260 824 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 ALDH5A1P51649 535 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-207ENST00000483969 HSD17B4P51659 736 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
COL8A1-207ENST00000483969 GHRHRQ02643 423 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 MLLT1Q03111 559 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-207ENST00000483969 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-207ENST00000483969 PRSS36Q5K4E3 855 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 ARHGEF16Q5VV41 709 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 IQSEC1Q6DN90 963 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-207ENST00000483969 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 ANKMY2Q8IV38 441 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 TEX2Q8IWB9 1127 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 DTWD1Q8N5C7 304 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 ZNF713Q8N859 430 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-207ENST00000483969 TRPV1Q8NER1 839 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 MORC4Q8TE76 937 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 FGD4Q96M96 766 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 TAAR1Q96RJ0 339 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 RMDN3Q96TC7 470 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 KRTAP4-8Q9BYQ9 185 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 FRRS1LQ9P0K9 344 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 ZHX1Q9UKY1 873 aaPredicted RBP10.24□□□□□ -0.77
COL8A1-207ENST00000483969 MYH8P13535 1937 aa10.24□□□□□ -0.77
COL8A1-207ENST00000483969 LAMA4Q16363 1823 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 PRPF3O43395 683 aaKnown RBP10.23□□□□□ -0.77
COL8A1-207ENST00000483969 IFNAR1P17181 557 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 IDH3AP50213 366 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 ARSDP51689 593 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 STXBP2Q15833 593 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 HEATR3Q7Z4Q2 680 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 NECAB2Q7Z6G3 386 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 SMARCC2Q8TAQ2 1214 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 CALR3Q96L12 384 aaKnown RBP10.23□□□□□ -0.77
COL8A1-207ENST00000483969 GLT8D2Q9H1C3 349 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 SLKQ9H2G2 1235 aaPredicted RBP10.23□□□□□ -0.77
COL8A1-207ENST00000483969 PSTPIP2Q9H939 334 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 SPC25Q9HBM1 224 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 VTA1Q9NP79 307 aa10.23□□□□□ -0.77
COL8A1-207ENST00000483969 A0A0G2JMZ2 1700 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 hCG_1642624A0A1W2PR95 340 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 OPLAHO14841 1288 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 DUSP11O75319 330 aaKnown RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 EIF3JO75822 258 aaKnown RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 CDKL5O76039 1030 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 FARP2O94887 1054 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 HOXA13P31271 388 aaPredicted RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 RBM25P49756 843 aaKnown RBP10.22□□□□□ -0.77
COL8A1-207ENST00000483969 AK2P54819 239 aa10.22□□□□□ -0.77
COL8A1-207ENST00000483969 TNFAIP2Q03169 654 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms