RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PPME1Q9Y570 386 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 WDR81Q562E7 1941 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 ASB14A6NK59 587 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 CETN3O15182 167 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 CCP110O43303 1012 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 STRNO43815 780 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 STX10O60499 249 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 GCNT3O95395 438 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-204ENST00000480057 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 SCP2P22307 547 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 FECHP22830 423 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 ABCD1P33897 745 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 SNRPFP62306 86 aaKnown RBP12.16□□□□□ -0.46
VTI1A-204ENST00000480057 UBXN1Q04323 297 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 MAPK7Q13164 816 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 MYBPC2Q14324 1141 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 ZNF720Q7Z2F6 126 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-204ENST00000480057 FAM178BQ8IXR5 827 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 TC2NQ8N9U0 490 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 GLIS3Q8NEA6 775 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-204ENST00000480057 FGD4Q96M96 766 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 ERGIC2Q96RQ1 377 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 FIZ1Q96SL8 496 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 NOC4LQ9BVI4 516 aaKnown RBP12.16□□□□□ -0.46
VTI1A-204ENST00000480057 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 FGFBP2Q9BYJ0 223 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 C17orf75Q9HAS0 396 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 TBC1D7Q9P0N9 293 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 CGNQ9P2M7 1197 aaKnown RBP12.16□□□□□ -0.46
VTI1A-204ENST00000480057 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
VTI1A-204ENST00000480057 IGKV6D-21A0A0A0MT36 114 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 ZBTB39O15060 712 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 SLC16A3O15427 465 aaKnown RBP12.15□□□□□ -0.46
VTI1A-204ENST00000480057 ARHGAP6O43182 974 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 HIP1RO75146 1068 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 PPP1R37O75864 691 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 STBD1O95210 358 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 MYBP10242 640 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 PLS3P13797 630 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 CASP5P51878 434 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 RTP1P59025 263 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 RAD51AP2Q09MP3 1159 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 UGCGQ16739 394 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 VWA3BQ502W6 1294 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 XKR3Q5GH77 459 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 MIIPQ5JXC2 388 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 ODR4Q5SWX8 454 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-204ENST00000480057 DAW1Q8N136 415 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 KCNN1Q92952 543 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 HVCN1Q96D96 273 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
VTI1A-204ENST00000480057 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
VTI1A-204ENST00000480057 MAFBQ9Y5Q3 323 aaPredicted RBP12.15□□□□□ -0.46
VTI1A-204ENST00000480057 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 ZNF236Q9UL36 1845 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 A0A1W2PQJ5 194 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 SOCS7O14512 581 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 MFAP3LO75121 409 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 OFD1O75665 1012 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 DGAT1O75907 488 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
VTI1A-204ENST00000480057 CYP2C8P10632 490 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 UBA1P22314 1058 aaKnown RBP12.14□□□□□ -0.47
VTI1A-204ENST00000480057 HOXD13P35453 343 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 TBC1D8BQ0IIM8 1120 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 ADAM9Q13443 819 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 FAM110CQ1W6H9 321 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 XKR9Q5GH70 373 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 SEPT14Q6ZU15 432 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 ANO5Q75V66 913 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 NELFCDQ8IXH7 590 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 MCPH1Q8NEM0 835 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 AFAP1L1Q8TED9 768 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 KIFAP3Q92845 792 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 BAG1Q99933 345 aaPredicted RBP12.14□□□□□ -0.47
VTI1A-204ENST00000480057 MKNK1Q9BUB5 465 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 NDST4Q9H3R1 872 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 NMRK2Q9NPI5 230 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 DIS3Q9Y2L1 958 aaKnown RBP12.14□□□□□ -0.47
VTI1A-204ENST00000480057 MYH11P35749 1972 aa12.14□□□□□ -0.47
VTI1A-204ENST00000480057 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-204ENST00000480057 BACH1O14867 736 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 ZNF862O60290 1169 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 PEX10O60683 326 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
VTI1A-204ENST00000480057 PRPF6O94906 941 aaKnown RBP12.13□□□□□ -0.47
VTI1A-204ENST00000480057 TUBB4AP04350 444 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 GYPCP04921 128 aa12.13□□□□□ -0.47
VTI1A-204ENST00000480057 NR2F2P24468 414 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms