RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 EPHA7Q15375 998 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 SEC23AQ15436 765 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 TERF2Q15554 542 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 SMAD2Q15796 467 aaKnown RBP6.73□□□□□ -1.33
RFC4-212ENST00000479307 HDGFL2Q7Z4V5 671 aaPredicted RBP6.73□□□□□ -1.33
RFC4-212ENST00000479307 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
RFC4-212ENST00000479307 ZNF610Q8N9Z0 462 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 CPA5Q8WXQ8 436 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 DDX11Q96FC9 970 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 TOMM22Q9NS69 142 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 USP36Q9P275 1121 aaKnown RBP6.73□□□□□ -1.33
RFC4-212ENST00000479307 RGS17Q9UGC6 210 aaPredicted RBP6.73□□□□□ -1.33
RFC4-212ENST00000479307 ASB1Q9Y576 335 aa6.73□□□□□ -1.33
RFC4-212ENST00000479307 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.72□□□□□ -1.33
RFC4-212ENST00000479307 S100BP04271 92 aaPredicted RBP6.72□□□□□ -1.33
RFC4-212ENST00000479307 NCAM1P13591 858 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 CD40P25942 277 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 ZNF200P98182 395 aaPredicted RBP6.72□□□□□ -1.33
RFC4-212ENST00000479307 ADCY1Q08828 1119 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 MTMR1Q13613 665 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 TARBP2Q15633 366 aaKnown RBP6.72□□□□□ -1.33
RFC4-212ENST00000479307 BROXQ5VW32 411 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 RASSF3Q86WH2 238 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 CNTD1Q8N815 330 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 EPB41L4BQ9H329 900 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 ATP10BO94823 1461 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 PLA2R1Q13018 1463 aa6.72□□□□□ -1.33
RFC4-212ENST00000479307 CPS1P31327 1500 aa6.71□□□□□ -1.33
RFC4-212ENST00000479307 REREQ9P2R6 1566 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 KATNA1O75449 491 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 PRKD3O94806 890 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 FBLN1P23142 703 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 PTX3P26022 381 aaPredicted RBP6.71□□□□□ -1.34
RFC4-212ENST00000479307 NKX3-2P78367 333 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 SRSF3P84103 164 aaKnown RBP6.71□□□□□ -1.34
RFC4-212ENST00000479307 ITKQ08881 620 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 CATSPEREQ5SY80 951 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 TEPPQ6URK8 271 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 ZNF605Q86T29 641 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 CLRN3Q8NCR9 226 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 COG1Q8WTW3 980 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 E2F7Q96AV8 911 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 ASPSCR1Q9BZE9 553 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 SIRT5Q9NXA8 310 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 SPEF1Q9Y4P9 236 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 ATP10AO60312 1499 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 GOLGA3Q08378 1498 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 TCOF1Q13428 1488 aaKnown RBP6.71□□□□□ -1.34
RFC4-212ENST00000479307 IRS2Q9Y4H2 1338 aa6.71□□□□□ -1.34
RFC4-212ENST00000479307 SUPT6HQ7KZ85 1726 aaKnown RBP6.7□□□□□ -1.34
RFC4-212ENST00000479307 TRAPPC8Q9Y2L5 1435 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 LRG1P02750 347 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 ASGR2P07307 311 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 AOAHP28039 575 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 CACNB2Q08289 660 aaPredicted RBP6.7□□□□□ -1.34
RFC4-212ENST00000479307 DBPQ10586 325 aaPredicted RBP6.7□□□□□ -1.34
RFC4-212ENST00000479307 SYDE2Q5VT97 1194 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 CD276Q5ZPR3 534 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 ESRP1Q6NXG1 681 aaKnown RBP6.7□□□□□ -1.34
RFC4-212ENST00000479307 FRMD7Q6ZUT3 714 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 ASB15Q8WXK1 588 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 LIN37Q96GY3 246 aaPredicted RBP6.7□□□□□ -1.34
RFC4-212ENST00000479307 AHCYL2Q96HN2 611 aaKnown RBP6.7□□□□□ -1.34
RFC4-212ENST00000479307 ZMAT4Q9H898 229 aa6.7□□□□□ -1.34
RFC4-212ENST00000479307 TEX51A0A1B0GUA7 166 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.69□□□□□ -1.34
RFC4-212ENST00000479307 RASSF10A6NK89 507 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 ENO2P09104 434 aaPredicted RBP6.69□□□□□ -1.34
RFC4-212ENST00000479307 ERVK-21P61565 698 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 ODR4Q5SWX8 454 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 GBP4Q96PP9 640 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 TRIM8Q9BZR9 551 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 NSUN3Q9H649 340 aaKnown RBP6.69□□□□□ -1.34
RFC4-212ENST00000479307 BCAS3Q9H6U6 928 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 DCP1AQ9NPI6 582 aaPredicted RBP6.69□□□□□ -1.34
RFC4-212ENST00000479307 TRHDEQ9UKU6 1024 aa6.69□□□□□ -1.34
RFC4-212ENST00000479307 NOC2LQ9Y3T9 749 aaKnown RBP6.69□□□□□ -1.34
RFC4-212ENST00000479307 MYO3AQ8NEV4 1616 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 MROH2AA6NES4 1674 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 TOM1O60784 492 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 SEMA7AO75326 666 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 ALDH1L1O75891 902 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 MMEP08473 750 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 PFKLP17858 780 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 CR1LQ2VPA4 569 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 VASNQ6EMK4 673 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 PHYKPLQ8IUZ5 450 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 C7orf31Q8N865 590 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 HIPK4Q8NE63 616 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 ZDHHC5Q9C0B5 715 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 BTBD7Q9P203 1132 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 KLHL42Q9P2K6 505 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 ARHGAP28Q9P2N2 729 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 MBD1Q9UIS9 605 aaPredicted RBP6.68□□□□□ -1.34
RFC4-212ENST00000479307 PCDHA5Q9Y5H7 936 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
RFC4-212ENST00000479307 PTPRKQ15262 1439 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms