RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 BARX2Q9UMQ3 279 aaPredicted RBP11.02□□□□□ -0.65
CCM2-210ENST00000478169 USP15Q9Y4E8 981 aaPredicted RBP11.02□□□□□ -0.65
CCM2-210ENST00000478169 IGKV6D-21A0A0A0MT36 114 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 hCG_1642624A0A1W2PR95 340 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 TBKBP1A7MCY6 615 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 MEIS1O00470 390 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 HBP1O60381 514 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 RPS6KA5O75582 802 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 ARP10275 920 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 KLRC1P26715 233 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 GATMP50440 423 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 TMEM266Q2M3C6 531 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
CCM2-210ENST00000478169 SLC24A5Q71RS6 500 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 HEATR3Q7Z4Q2 680 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 SUGP1Q8IWZ8 645 aaKnown RBP11.01□□□□□ -0.65
CCM2-210ENST00000478169 CCDC82Q8N4S0 544 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 PRSS33Q8NF86 280 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 CYP2W1Q8TAV3 490 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 SUSD6Q92537 303 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 AGO4Q9HCK5 861 aaKnown RBP11.01□□□□□ -0.65
CCM2-210ENST00000478169 RIC8AQ9NPQ8 531 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 COL1A2P08123 1366 aa11.01□□□□□ -0.65
CCM2-210ENST00000478169 DENND3A2RUS2 1198 aa11□□□□□ -0.65
CCM2-210ENST00000478169 C9IYK1 514 aa11□□□□□ -0.65
CCM2-210ENST00000478169 hCG_1984214I3L0E3 225 aa11□□□□□ -0.65
CCM2-210ENST00000478169 FSCN2O14926 492 aa11□□□□□ -0.65
CCM2-210ENST00000478169 GPR182O15218 404 aa11□□□□□ -0.65
CCM2-210ENST00000478169 MGEA5O60502 916 aa11□□□□□ -0.65
CCM2-210ENST00000478169 PPFIA3O75145 1194 aa11□□□□□ -0.65
CCM2-210ENST00000478169 FGF18O76093 207 aa11□□□□□ -0.65
CCM2-210ENST00000478169 SRGAP2BP0DMP2 458 aa11□□□□□ -0.65
CCM2-210ENST00000478169 SIGLEC14Q08ET2 396 aa11□□□□□ -0.65
CCM2-210ENST00000478169 ITGB3BPQ13352 177 aaPredicted RBP11□□□□□ -0.65
CCM2-210ENST00000478169 DUSP6Q16828 381 aa11□□□□□ -0.65
CCM2-210ENST00000478169 ZNF484Q5JVG2 852 aa11□□□□□ -0.65
CCM2-210ENST00000478169 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
CCM2-210ENST00000478169 PPP1R18Q6NYC8 613 aa11□□□□□ -0.65
CCM2-210ENST00000478169 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
CCM2-210ENST00000478169 TMEM184AQ6ZMB5 413 aa11□□□□□ -0.65
CCM2-210ENST00000478169 NIPA1Q7RTP0 329 aa11□□□□□ -0.65
CCM2-210ENST00000478169 THNSL1Q8IYQ7 743 aa11□□□□□ -0.65
CCM2-210ENST00000478169 KIAA0319LQ8IZA0 1049 aa11□□□□□ -0.65
CCM2-210ENST00000478169 FBXL6Q8N531 539 aa11□□□□□ -0.65
CCM2-210ENST00000478169 ZNF713Q8N859 430 aaPredicted RBP11□□□□□ -0.65
CCM2-210ENST00000478169 NEK1Q96PY6 1258 aa11□□□□□ -0.65
CCM2-210ENST00000478169 ADAM2Q99965 735 aa11□□□□□ -0.65
CCM2-210ENST00000478169 GLT8D2Q9H1C3 349 aa11□□□□□ -0.65
CCM2-210ENST00000478169 ELAC1Q9H777 363 aaKnown RBP11□□□□□ -0.65
CCM2-210ENST00000478169 GINS2Q9Y248 185 aa11□□□□□ -0.65
CCM2-210ENST00000478169 LZTS1Q9Y250 596 aa11□□□□□ -0.65
CCM2-210ENST00000478169 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
CCM2-210ENST00000478169 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
CCM2-210ENST00000478169 BACH1O14867 736 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 SLC27A2O14975 620 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 PER2O15055 1255 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 LAG3P18627 525 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 SREBF1P36956 1147 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 ADCY7P51828 1080 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 CRYBB1P53674 252 aaPredicted RBP10.99□□□□□ -0.65
CCM2-210ENST00000478169 NAPAP54920 295 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 ERVFC1P60507 584 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 FAM189BP81408 668 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 PLCB3Q01970 1234 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 FAM102BQ5T8I3 360 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 IER5LQ5T953 404 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 WWC2Q6AWC2 1192 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 SYNE3Q6ZMZ3 975 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 COLGALT1Q8NBJ5 622 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 RASGRP4Q8TDF6 673 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 TMEM40Q8WWA1 233 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 RPGRIP1Q96KN7 1286 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 ANO3Q9BYT9 981 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 LSG1Q9H089 658 aaKnown RBP10.99□□□□□ -0.65
CCM2-210ENST00000478169 IRF2BPLQ9H1B7 796 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 CDHR5Q9HBB8 845 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 ATP6V0A4Q9HBG4 840 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 TYW1Q9NV66 732 aaKnown RBP10.99□□□□□ -0.65
CCM2-210ENST00000478169 RBM28Q9NW13 759 aaKnown RBP10.99□□□□□ -0.65
CCM2-210ENST00000478169 TMEM161AQ9NX61 479 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 TMEM260Q9NX78 707 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 PUF60Q9UHX1 559 aaKnown RBP10.99□□□□□ -0.65
CCM2-210ENST00000478169 ST3GAL5Q9UNP4 418 aa10.99□□□□□ -0.65
CCM2-210ENST00000478169 ZBTB42B2RXF5 422 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 CCNE2O96020 404 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 IBSPP21815 317 aaPredicted RBP10.98□□□□□ -0.65
CCM2-210ENST00000478169 ZNF76P36508 570 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 TCF15Q12870 199 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 KCNC3Q14003 757 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 COL9A3Q14050 684 aaPredicted RBP10.98□□□□□ -0.65
CCM2-210ENST00000478169 NECTIN1Q15223 517 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 CREB3L3Q68CJ9 461 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 TYW1BQ6NUM6 668 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 ANKRD54Q6NXT1 300 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 MIS18BP1Q6P0N0 1132 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 PDXDC2PQ6P474 469 aa10.98□□□□□ -0.65
CCM2-210ENST00000478169 RAB11FIP4Q86YS3 637 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms