RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 EXOSC10Q01780 885 aaKnown RBP12.32□□□□□ -0.44
CDRT1-205ENST00000475944 UBE3AQ05086 875 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 TMEM266Q2M3C6 531 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 HERC4Q5GLZ8 1057 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-205ENST00000475944 ZNF484Q5JVG2 852 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 SPOUT1Q5T280 376 aaKnown RBP12.32□□□□□ -0.44
CDRT1-205ENST00000475944 MCTP2Q6DN12 878 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 MIS18BP1Q6P0N0 1132 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 DHX32Q7L7V1 743 aaKnown RBP12.32□□□□□ -0.44
CDRT1-205ENST00000475944 ADGRD2Q7Z7M1 963 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 PLA2G4DQ86XP0 818 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 CCDC60Q8IWA6 550 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-205ENST00000475944 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 ERVK-5Q9HDB9 667 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 ZNF302Q9NR11 478 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 TMEM260Q9NX78 707 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 TCEAL9Q9UHQ7 104 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 MUTYHQ9UIF7 546 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 BRPF3Q9ULD4 1205 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 PCDHB12Q9Y5F1 795 aa12.32□□□□□ -0.44
CDRT1-205ENST00000475944 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 KLF18A0A0U1RQI7 1052 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 IPO5O00410 1097 aaKnown RBP12.31□□□□□ -0.44
CDRT1-205ENST00000475944 CCNE2O96020 404 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 NRIP1P48552 1158 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 GATMP50440 423 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 SETQ01105 290 aaPredicted RBP12.31□□□□□ -0.44
CDRT1-205ENST00000475944 COASYQ13057 564 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 KRT32Q14532 448 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 BMP2KLQ5H9B9 411 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 SLC24A5Q71RS6 500 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 RBM23Q86U06 439 aaKnown RBP12.31□□□□□ -0.44
CDRT1-205ENST00000475944 RNF135Q8IUD6 432 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 CKAP2LQ8IYA6 745 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 KIAA0319LQ8IZA0 1049 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 MFSD14AQ96MC6 490 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 TCEANC2Q96MN5 208 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 ADAM2Q99965 735 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 RGS18Q9NS28 235 aa12.31□□□□□ -0.44
CDRT1-205ENST00000475944 NOC2LQ9Y3T9 749 aaKnown RBP12.31□□□□□ -0.44
CDRT1-205ENST00000475944 MYO7AQ13402 2215 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 IGLV3-22A0A075B6J6 115 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CCDC196A0A1B0GTZ2 297 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 TBKBP1A7MCY6 615 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 C9IYK1 514 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 FAM86B1E9PN63 330 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 MGEA5O60502 916 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CYP3A4P08684 503 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 FAM86B2P0C5J1 330 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CDC27P30260 824 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CRYBB1P53674 252 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 FGD1P98174 961 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 TSGA10IPQ3SY00 556 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 JAKMIP3Q5VZ66 844 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 PDE12Q6L8Q7 609 aaKnown RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 ZNF746Q6NUN9 644 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 SWSAP1Q6NVH7 229 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 HFE2Q6ZVN8 426 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 ALYREFQ86V81 257 aaKnown RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 TMEM40Q8WWA1 233 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CDCA3Q99618 268 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 ZNF577Q9BSK1 485 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 TLE6Q9H808 572 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 TLR9Q9NR96 1032 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 TBC1D22BQ9NU19 505 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 CLEC1BQ9P126 229 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-205ENST00000475944 ST3GAL5Q9UNP4 418 aa12.3□□□□□ -0.44
CDRT1-205ENST00000475944 PLXNA4Q9HCM2 1894 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 ZBTB42B2RXF5 422 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 DHX15O43143 795 aaKnown RBP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 FGF18O76093 207 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 C22orf31O95567 290 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 GLP2RO95838 553 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 METAP2P50579 478 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 KIZQ2M2Z5 673 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 ADCK5Q3MIX3 580 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 FAM228AQ86W67 206 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 THNSL1Q8IYQ7 743 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 REXO1Q8N1G1 1221 aaKnown RBP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 CRYGNQ8WXF5 182 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 EDAQ92838 391 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 FBXL18Q96ME1 805 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 OSMRQ99650 979 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 ZMYND12Q9H0C1 365 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 ELAC1Q9H777 363 aaKnown RBP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 ATP6V0A4Q9HBG4 840 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 FAM217BQ9NTX9 383 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms