RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ZNF276Q8N554 614 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 GIPC2Q8TF65 315 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 GPRASP2Q96D09 838 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 WNK4Q96J92 1243 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 PHF20Q9BVI0 1012 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 BTBD2Q9BX70 525 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 GALNT8Q9NY28 637 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 HECAQ9UBI9 543 aaPredicted RBP3.59□□□□□ -1.83
CCDC39-203ENST00000473854 FAM184BQ9ULE4 1060 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 TELO2Q9Y4R8 837 aa3.59□□□□□ -1.83
CCDC39-203ENST00000473854 FAM47E-STBD1D6RA91 191 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 COL6A2P12110 1019 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 SESN2P58004 480 aaPredicted RBP3.58□□□□□ -1.84
CCDC39-203ENST00000473854 CCDC27Q2M243 656 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 RABL3Q5HYI8 236 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 HECTD2Q5U5R9 776 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 TMEM200BQ69YZ2 307 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 OLFML1Q6UWY5 402 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 Q6ZRM9 215 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 LRRC55Q6ZSA7 311 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 RD3Q7Z3Z2 195 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 BRIP1Q9BX63 1249 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 GPR87Q9BY21 358 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 EPN3Q9H201 632 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 VWA7Q9Y334 891 aa3.58□□□□□ -1.84
CCDC39-203ENST00000473854 GRID2IPA4D2P6 1211 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 NKRFO15226 690 aaKnown RBP eCLIP3.57□□□□□ -1.84
CCDC39-203ENST00000473854 SUSD5O60279 629 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 RACK1P63244 317 aaKnown RBP3.57□□□□□ -1.84
CCDC39-203ENST00000473854 BTBD8Q5XKL5 378 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 LBX2Q6XYB7 198 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 DPH6Q7L8W6 267 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 VRK3Q8IV63 474 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.57□□□□□ -1.84
CCDC39-203ENST00000473854 DCAF4Q8WV16 495 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 KCNJ15Q99712 375 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 AGO3Q9H9G7 860 aaKnown RBP3.57□□□□□ -1.84
CCDC39-203ENST00000473854 CYP4F11Q9HBI6 524 aa3.57□□□□□ -1.84
CCDC39-203ENST00000473854 PPARGC1AQ9UBK2 798 aaKnown RBP3.57□□□□□ -1.84
CCDC39-203ENST00000473854 XDHP47989 1333 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 IKBKBO14920 756 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 KIAA0355O15063 1070 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 PTPN1P18031 435 aaKnown RBP3.56□□□□□ -1.84
CCDC39-203ENST00000473854 NASPP49321 788 aaPredicted RBP3.56□□□□□ -1.84
CCDC39-203ENST00000473854 HERVK_113P62684 666 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 MAP3K12Q12852 859 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 ELAVL1Q15717 326 aaKnown RBP3.56□□□□□ -1.84
CCDC39-203ENST00000473854 ERCC6LQ2NKX8 1250 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 GRAMD4Q6IC98 578 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 MFSD5Q6N075 450 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 EP400NLQ6ZTU2 488 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 USP53Q70EK8 1073 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 SEC16BQ96JE7 1060 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 C16orf92Q96LL3 132 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 ALG1Q9BT22 464 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 RIC8BQ9NVN3 520 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 TRPS1Q9UHF7 1281 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 CDC42EP3Q9UKI2 254 aa3.56□□□□□ -1.84
CCDC39-203ENST00000473854 MSCO60682 206 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 FAM20BO75063 409 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 IPO13O94829 963 aaKnown RBP3.55□□□□□ -1.84
CCDC39-203ENST00000473854 AOAHP28039 575 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 USP14P54578 494 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 MAPK7Q13164 816 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 LDLRAD1Q5T700 205 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 HTR3DQ70Z44 454 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 FAM178BQ8IXR5 827 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 IFNL3Q8IZI9 196 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 MLST8Q9BVC4 326 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 OR10A5Q9H207 317 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 SLC6A15Q9H2J7 730 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 SYNPO2LQ9H987 977 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 SRPK3Q9UPE1 567 aa3.55□□□□□ -1.84
CCDC39-203ENST00000473854 SPATA31A6Q5VVP1 1343 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 MFAP3LO75121 409 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 H2AFYO75367 372 aaKnown RBP3.54□□□□□ -1.84
CCDC39-203ENST00000473854 MAFO75444 373 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-203ENST00000473854 ONECUT2O95948 504 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 C1RP00736 705 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 SOD2P04179 222 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 ECE1P42892 770 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 AVPR1BP47901 424 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 ELLP55199 621 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-203ENST00000473854 GPR85P60893 370 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 MOGSQ13724 837 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 TIGD2Q4W5G0 525 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 PLEKHG4Q58EX7 1191 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 TNNI3KQ59H18 835 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 FIGNQ5HY92 759 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 KANK2Q63ZY3 851 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 FAM111BQ6SJ93 734 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 C6orf15Q6UXA7 325 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-203ENST00000473854 FAM169BQ8N8A8 192 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 SUPT20HQ8NEM7 779 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 SLC7A6OSQ96CW6 309 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-203ENST00000473854 CD244Q9BZW8 370 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 INSL6Q9Y581 213 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 HS3ST4Q9Y661 456 aa3.54□□□□□ -1.84
CCDC39-203ENST00000473854 ATP23Q9Y6H3 246 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms