RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 SLC12A8A0AV02 714 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 PRAMEF22A3QJZ6 481 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 FOXP2O15409 715 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 HIP1RO75146 1068 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 NPTXRO95502 500 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 MMEP08473 750 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 MC4RP32245 332 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 RBL2Q08999 1139 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 MOGSQ13724 837 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 NFYCQ13952 458 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 TMEM132BQ14DG7 1078 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 PCOLCEQ15113 449 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 LARP4Q71RC2 724 aaKnown RBP eCLIP5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 FILIP1Q7Z7B0 1213 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 EXTL1Q92935 676 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 ARMC5Q96C12 935 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 SRPK1Q96SB4 655 aaKnown RBP5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 AMNQ9BXJ7 453 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 OR10A5Q9H207 317 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 OR10A2Q9H208 303 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 NELFAQ9H3P2 528 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 SLC52A2Q9HAB3 445 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 MSL2Q9HCI7 577 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 COQ6Q9Y2Z9 468 aa5.3□□□□□ -1.56
PRPF40A-207ENST00000471701 FAM221BA6H8Z2 402 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 SLPIP03973 132 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 MRE11P49959 708 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 HHEXQ03014 270 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 TBR1Q16650 682 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 TRIM68Q6AZZ1 485 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 GRAMD4Q6IC98 578 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 LRSAM1Q6UWE0 723 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 RNF207Q6ZRF8 634 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 Q6ZSN1 163 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 C1orf210Q8IVY1 113 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 C2orf69Q8N8R5 385 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 ASB15Q8WXK1 588 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 DNAJC7Q99615 494 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 PLA2G12BQ9BX93 195 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 CELF4Q9BZC1 486 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 KIAA1683Q9H0B3 1180 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 ASB1Q9Y576 335 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 SLC30A1Q9Y6M5 507 aa5.29□□□□□ -1.56
PRPF40A-207ENST00000471701 NPIPB8E9PQR5 432 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 GOLGA6L22H0YM25 854 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 MPIG6BO95866 241 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 HIBADHP31937 336 aaKnown RBP5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 SEC23AQ15436 765 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 SGMS1Q86VZ5 419 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 GSTCDQ8NEC7 633 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 ZSWIM2Q8NEG5 633 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 SLC7A14Q8TBB6 771 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 ERCC4Q92889 916 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 C8orf37Q96NL8 207 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 PLA2G3Q9NZ20 509 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 SFMBT1Q9UHJ3 866 aa5.28□□□□□ -1.56
PRPF40A-207ENST00000471701 RASGRP1O95267 797 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 APEX1P27695 318 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 TGFB2P61812 414 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 MAP3K12Q12852 859 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 FOXL1Q12952 345 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 SERINC3Q13530 473 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 RASA3Q14644 834 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 GRM7Q14831 915 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 LSM12Q3MHD2 195 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 MIIPQ5JXC2 388 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 KANK2Q63ZY3 851 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 TMEM200BQ69YZ2 307 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 MAMDC4Q6UXC1 1216 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 OVCH1Q7RTY7 1134 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 THAP3Q8WTV1 239 aaPredicted RBP5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 DLG3Q92796 817 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 MKL1Q969V6 931 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 ZNF503Q96F45 646 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 PCED1AQ9H1Q7 454 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 SNTG2Q9NY99 539 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 B3GALT1Q9Y5Z6 326 aa5.27□□□□□ -1.57
PRPF40A-207ENST00000471701 MATN2O00339 956 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 PLSCR1O15162 318 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 SDHAP31040 664 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 MSX2P35548 267 aaPredicted RBP5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 ARHGAP44Q17R89 818 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 TRIM61Q5EBN2 209 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 THEMISQ8N1K5 641 aaPredicted RBP5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 IGSF22Q8N9C0 903 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 OR14K1Q8NGZ2 314 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 E2F7Q96AV8 911 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 SCLYQ96I15 445 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 PLEKHG4BQ96PX9 1271 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 MRPL4Q9BYD3 311 aaKnown RBP5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 SLITRK6Q9H5Y7 841 aa5.26□□□□□ -1.57
PRPF40A-207ENST00000471701 TCRBV16S1A1N1A0A5B0 115 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 H2AFYO75367 372 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 MCM7P33993 719 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 STAT5BP51692 787 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 SESN2P58004 480 aaPredicted RBP5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 IRF9Q00978 393 aa5.25□□□□□ -1.57
PRPF40A-207ENST00000471701 PTH1RQ03431 593 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms