RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 RASA3Q14644 834 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 SLC18A3Q16572 532 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 CNPY1Q3B7I2 92 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 CEP128Q6ZU80 1094 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 LONP2Q86WA8 852 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 LRRC43Q8N309 656 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 LRRC8CQ8TDW0 803 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 IRGQQ8WZA9 623 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 TNFRSF25Q93038 417 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 ROPN1BQ9BZX4 212 aaPredicted RBP9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 DPH5Q9H2P9 285 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 ROPN1Q9HAT0 212 aaPredicted RBP9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 CEP72Q9P209 647 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 ITGB1BP2Q9UKP3 347 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 TTC7AQ9ULT0 858 aaPredicted RBP9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 THRAP3Q9Y2W1 955 aaKnown RBP9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 RGPD8O14715 1765 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 DLEC1Q9Y238 1755 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 TCP11X1B4DZS4 312 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 SMAPO00193 183 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 DRG2P55039 364 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 PPARDQ03181 441 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 SULT2A1Q06520 285 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 MCL1Q07820 350 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 MAP7Q14244 749 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 WTAPQ15007 396 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF174Q15697 407 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 SFMBT2Q5VUG0 894 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 LMBR1LQ6UX01 489 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 PHC3Q8NDX5 983 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 XAGE3Q8WTP9 111 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 UCMAQ8WVF2 138 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 CKAP2Q8WWK9 683 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 MTFR1LQ9H019 292 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 DDX47Q9H0S4 455 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 NLRC4Q9NPP4 1024 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 FAM207AQ9NSI2 230 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 USP40Q9NVE5 1235 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 PARP2Q9UGN5 583 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 TRIM33Q9UPN9 1127 aa9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 DIS3Q9Y2L1 958 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-207ENST00000469334 CAMTA1Q9Y6Y1 1673 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ATP9AO75110 1047 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 OATP04181 439 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ADD2P35612 726 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 IFNAR2P48551 515 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 SLC4A8Q2Y0W8 1093 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 FOXR2Q6PJQ5 311 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 PPFIBP2Q8ND30 876 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 MAML3Q96JK9 1138 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 MAF1Q9H063 256 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 TLE6Q9H808 572 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 MMRN2Q9H8L6 949 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 RMI1Q9H9A7 625 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 METTL14Q9HCE5 456 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ZDHHC18Q9NUE0 388 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 KBTBD4Q9NVX7 518 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 SEC63Q9UGP8 760 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DENND2AQ9ULE3 1009 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DAAM1Q9Y4D1 1078 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 SCN11AQ9UI33 1791 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 NUP188Q5SRE5 1749 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 A0A087WZG4 1122 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 TMEM221A6NGB7 291 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 EPHB6O15197 1021 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 TTI1O43156 1089 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 PFDN1O60925 122 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ZPR1O75312 459 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DCTN3O75935 186 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ZBTB48P10074 688 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 IDO1P14902 403 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DNA2P51530 1060 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 FOXO4P98177 505 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 POU5F1Q01860 360 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DHX34Q14147 1143 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 UBE3CQ15386 1083 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 MTFR1Q15390 333 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 CCDC6Q16204 474 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 C1orf141Q5JVX7 400 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ANKRD40Q6AI12 368 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 UNC13DQ70J99 1090 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 SMYD1Q8NB12 490 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 FANCBQ8NB91 859 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 ZNF653Q96CK0 615 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 RUNDC3BQ96NL0 473 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 SMC6Q96SB8 1091 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DDX23Q9BUQ8 820 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 OCEL1Q9H607 264 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 DDX43Q9NXZ2 648 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 SUCLA2Q9P2R7 463 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 AMACRQ9UHK6 382 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 GGT7Q9UJ14 662 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 RASAL2Q9UJF2 1139 aa9.76□□□□□ -0.85
SMARCE1-207ENST00000469334 BZW2Q9Y6E2 419 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms