RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 B3GNT9Q6UX72 402 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 KIAA0319LQ8IZA0 1049 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 USP38Q8NB14 1042 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 RDM1Q8NG50 284 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 ARNTL2Q8WYA1 636 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 FAM167AQ96KS9 214 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 CELF4Q9BZC1 486 aaKnown RBP19.3■□□□□ 0.68
SSBP1-207ENST00000468267 LIMCH1Q9UPQ0 1083 aa19.3■□□□□ 0.68
SSBP1-207ENST00000468267 KDM3AQ9Y4C1 1321 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 RFXAPO00287 272 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 CHMP2AO43633 222 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 ZNF862O60290 1169 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 JAK2O60674 1132 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 C22orf31O95567 290 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 POU3F3P20264 500 aaPredicted RBP19.29■□□□□ 0.68
SSBP1-207ENST00000468267 PPP4R3AQ6IN85 833 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 PIK3AP1Q6ZUJ8 805 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 TRMT1LQ7Z2T5 733 aaKnown RBP19.29■□□□□ 0.68
SSBP1-207ENST00000468267 SPRED2Q7Z698 418 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 NEK8Q86SG6 692 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 KIF2CQ99661 725 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 AGO3Q9H9G7 860 aaKnown RBP19.29■□□□□ 0.68
SSBP1-207ENST00000468267 NRBP2Q9NSY0 501 aa19.29■□□□□ 0.68
SSBP1-207ENST00000468267 TTC28Q96AY4 2481 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 LINC01553A4QN01 128 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 ENPP3O14638 875 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 SLC37A4O43826 429 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 UPP2O95045 317 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 GCFC2P16383 781 aaKnown RBP19.28■□□□□ 0.68
SSBP1-207ENST00000468267 CD52P31358 61 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 KRT2P35908 639 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 ST3GAL1Q11201 340 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 UGCGQ16739 394 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 MIER3Q7Z3K6 550 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 TNFRSF25Q93038 417 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 FAM20AQ96MK3 541 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 CEP131Q9UPN4 1083 aa19.28■□□□□ 0.68
SSBP1-207ENST00000468267 XIRP2A4UGR9 3374 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 MAGEB2O15479 319 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 OATP04181 439 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 ERVK-21P61565 698 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 PRKCEQ02156 737 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 NR5A1Q13285 461 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 EARS2Q5JPH6 523 aaKnown RBP19.27■□□□□ 0.68
SSBP1-207ENST00000468267 SP7Q8TDD2 431 aaPredicted RBP19.27■□□□□ 0.68
SSBP1-207ENST00000468267 PPM1EQ8WY54 764 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 TGS1Q96RS0 853 aaKnown RBP19.27■□□□□ 0.68
SSBP1-207ENST00000468267 NAP1L4Q99733 375 aaKnown RBP19.27■□□□□ 0.68
SSBP1-207ENST00000468267 BRMS1Q9HCU9 246 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 KCNMB3Q9NPA1 279 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 PADI3Q9ULW8 664 aa19.27■□□□□ 0.68
SSBP1-207ENST00000468267 CCNT1O60563 726 aaKnown RBP19.26■□□□□ 0.67
SSBP1-207ENST00000468267 CCDC85BQ15834 202 aaPredicted RBP19.26■□□□□ 0.67
SSBP1-207ENST00000468267 METTL13Q8N6R0 699 aa19.26■□□□□ 0.67
SSBP1-207ENST00000468267 FTHL17Q9BXU8 183 aa19.26■□□□□ 0.67
SSBP1-207ENST00000468267 CDHR5Q9HBB8 845 aa19.26■□□□□ 0.67
SSBP1-207ENST00000468267 MTCH2Q9Y6C9 303 aa19.26■□□□□ 0.67
SSBP1-207ENST00000468267 FAM205CA6NFA0 338 aa19.25■□□□□ 0.67
SSBP1-207ENST00000468267 TBX3O15119 743 aa19.25■□□□□ 0.67
SSBP1-207ENST00000468267 GTPBP6O43824 516 aaPredicted RBP19.25■□□□□ 0.67
SSBP1-207ENST00000468267 MMP1P03956 469 aa19.25■□□□□ 0.67
SSBP1-207ENST00000468267 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
SSBP1-207ENST00000468267 PAK2Q13177 524 aa19.25■□□□□ 0.67
SSBP1-207ENST00000468267 KRT40Q6A162 431 aa19.25■□□□□ 0.67
SSBP1-207ENST00000468267 RTN4RL1Q86UN2 441 aaPredicted RBP19.25■□□□□ 0.67
SSBP1-207ENST00000468267 ZSCAN31Q96LW9 406 aaPredicted RBP19.25■□□□□ 0.67
SSBP1-207ENST00000468267 YME1L1Q96TA2 773 aa19.25■□□□□ 0.67
SSBP1-207ENST00000468267 NCOR1O75376 2440 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 BRWD1Q9NSI6 2320 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 BTBD18B2RXH4 712 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 LPXNO60711 386 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 STBD1O95210 358 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 GRB10Q13322 594 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 PPP2R5CQ13362 524 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 TRIM29Q14134 588 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 EFCAB12Q6NXP0 572 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 FAM43BQ6ZT52 329 aaPredicted RBP19.24■□□□□ 0.67
SSBP1-207ENST00000468267 CCDC83Q8IWF9 413 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 LINC01465Q8N7H1 131 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 LINC01599Q8WXQ3 324 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 HAS1Q92839 578 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 LLPHQ9BRT6 129 aaKnown RBP19.24■□□□□ 0.67
SSBP1-207ENST00000468267 NIFKQ9BYG3 293 aaKnown RBP19.24■□□□□ 0.67
SSBP1-207ENST00000468267 SUGCTQ9HAC7 445 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 VAV3Q9UKW4 847 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 MTUS1Q9ULD2 1270 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 GINS2Q9Y248 185 aa19.24■□□□□ 0.67
SSBP1-207ENST00000468267 NLRC5Q86WI3 1866 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 EML1O00423 815 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 GPR32O75388 356 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 VTNP04004 478 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 TMOD1P28289 359 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 CLCN3P51790 818 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 FOSBP53539 338 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 CRYBB1P53674 252 aaPredicted RBP19.23■□□□□ 0.67
SSBP1-207ENST00000468267 TARBP2Q15633 366 aaKnown RBP19.23■□□□□ 0.67
SSBP1-207ENST00000468267 KIZQ2M2Z5 673 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 TMEM266Q2M3C6 531 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 XKR3Q5GH77 459 aa19.23■□□□□ 0.67
SSBP1-207ENST00000468267 DIS3L2Q8IYB7 885 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms