RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ATP2B1P20020 1258 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 PRKCEQ02156 737 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 CCDC85BQ15834 202 aaPredicted RBP13.01□□□□□ -0.33
CDHR3-205ENST00000468143 TMEM266Q2M3C6 531 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 POTEDQ86YR6 584 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 NME8Q8N427 588 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 HAS1Q92839 578 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 APBB2Q92870 758 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 RAD9AQ99638 391 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
CDHR3-205ENST00000468143 KCNMB3Q9NPA1 279 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 IGSF9BQ9UPX0 1349 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 COL1A2P08123 1366 aa13.01□□□□□ -0.33
CDHR3-205ENST00000468143 EPOPA6NHQ4 379 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 WNT7AO00755 349 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 ENPP3O14638 875 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 VTNP04004 478 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 GCFC2P16383 781 aaKnown RBP13□□□□□ -0.33
CDHR3-205ENST00000468143 CLCN3P51790 818 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 RABEP1Q15276 862 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 EFCAB12Q6NXP0 572 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 TSHZ1Q6ZSZ6 1077 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 TOP1MTQ969P6 601 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 C8orf76Q96K31 380 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 ZNF668Q96K58 619 aaPredicted RBP13□□□□□ -0.33
CDHR3-205ENST00000468143 FAM167AQ96KS9 214 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 FAM20AQ96MK3 541 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 NAP1L4Q99733 375 aaKnown RBP13□□□□□ -0.33
CDHR3-205ENST00000468143 LLPHQ9BRT6 129 aaKnown RBP13□□□□□ -0.33
CDHR3-205ENST00000468143 SUGCTQ9HAC7 445 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 VAV3Q9UKW4 847 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 CEP131Q9UPN4 1083 aa13□□□□□ -0.33
CDHR3-205ENST00000468143 STBD1O95210 358 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
CDHR3-205ENST00000468143 NFX1Q12986 1120 aaKnown RBP12.99□□□□□ -0.33
CDHR3-205ENST00000468143 KIZQ2M2Z5 673 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 MTERF2Q49AM1 385 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 RTN4RL1Q86UN2 441 aaPredicted RBP12.99□□□□□ -0.33
CDHR3-205ENST00000468143 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 USP38Q8NB14 1042 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 TMEM40Q8WWA1 233 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 SH2B1Q9NRF2 756 aaPredicted RBP12.99□□□□□ -0.33
CDHR3-205ENST00000468143 SEPT9Q9UHD8 586 aaPredicted RBP12.99□□□□□ -0.33
CDHR3-205ENST00000468143 PADI3Q9ULW8 664 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 NOC2LQ9Y3T9 749 aaKnown RBP12.99□□□□□ -0.33
CDHR3-205ENST00000468143 INSL6Q9Y581 213 aa12.99□□□□□ -0.33
CDHR3-205ENST00000468143 LINC01553A4QN01 128 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 MAGEB2O15479 319 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
CDHR3-205ENST00000468143 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
CDHR3-205ENST00000468143 RPLP2P05387 115 aaKnown RBP12.98□□□□□ -0.33
CDHR3-205ENST00000468143 PSMC5P62195 406 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 PAK2Q13177 524 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDHR3-205ENST00000468143 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 YME1L1Q96TA2 773 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 OSMRQ99650 979 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 AKT3Q9Y243 479 aa12.98□□□□□ -0.33
CDHR3-205ENST00000468143 GBF1Q92538 1859 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 KDM3AQ9Y4C1 1321 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 TBX3O15119 743 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 ST18O60284 1047 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 GPR32O75388 356 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 RPS6KA5O75582 802 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 TXKP42681 527 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 CRYBB1P53674 252 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 NLRP11P59045 1033 aaKnown RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 HMGN5P82970 282 aaKnown RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 HTRA4P83105 476 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 TBC1D8BQ0IIM8 1120 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 DRP2Q13474 957 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 CTTNQ14247 550 aaKnown RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 EPHA7Q15375 998 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 TARBP2Q15633 366 aaKnown RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 CALCRLQ16602 461 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 PLA2G4FQ68DD2 849 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 ANO5Q75V66 913 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 LINC01599Q8WXQ3 324 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 DYDC2Q96IM9 177 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 C17orf80Q9BSJ5 609 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 NIFKQ9BYG3 293 aaKnown RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 PRDM6Q9NQX0 595 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 WRAP73Q9P2S5 460 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-205ENST00000468143 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
CDHR3-205ENST00000468143 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
CDHR3-205ENST00000468143 TMOD1P28289 359 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms