RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 C16orf92Q96LL3 132 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 TUBGCP5Q96RT8 1024 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 PSMD1Q99460 953 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 MYL10Q9BUA6 226 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 UCKL1Q9NWZ5 548 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 OBP2AQ9NY56 170 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 PLA2G2DQ9UNK4 145 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 FAM50BQ9Y247 325 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 GIT1Q9Y2X7 761 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 PPP2R3BQ9Y5P8 575 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 PRSS38A1L453 326 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 GOLGA6CA6NDK9 693 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 GOLGA6BA6NDN3 693 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 HYAL3O43820 417 aaPredicted RBP5.35□□□□□ -1.55
VPS13A-209ENST00000467124 ADAMTS4O75173 837 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 MPOP05164 745 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 GOLGA6DP0CG33 693 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 C5AR1P21730 350 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 STAT5AP42229 794 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 MAPKAPK2P49137 400 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 FNTBP49356 437 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 ZNF267Q14586 743 aaPredicted RBP5.35□□□□□ -1.55
VPS13A-209ENST00000467124 GFOD2Q3B7J2 385 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 PAN2Q504Q3 1202 aaKnown RBP5.35□□□□□ -1.55
VPS13A-209ENST00000467124 PRAMEF9Q5VWM5 478 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 CBLL1Q75N03 491 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 EPM2AIP1Q7L775 607 aaPredicted RBP5.35□□□□□ -1.55
VPS13A-209ENST00000467124 CATIPQ7Z7H3 387 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 CERS3Q8IU89 383 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 CILP2Q8IUL8 1156 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 ZZZ3Q8IYH5 903 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 ABI1Q8IZP0 508 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 C7orf31Q8N865 590 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 INTS4Q96HW7 963 aaKnown RBP5.35□□□□□ -1.55
VPS13A-209ENST00000467124 KIRREL1Q96J84 757 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 RNF32Q9H0A6 362 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 ARNT2Q9HBZ2 717 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 SLC39A2Q9NP94 309 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 GOLGA6AQ9NYA3 693 aa5.35□□□□□ -1.55
VPS13A-209ENST00000467124 SAP30BPQ9UHR5 308 aaKnown RBP5.35□□□□□ -1.55
VPS13A-209ENST00000467124 SCO2A0A1W2PP80 73 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 AP1G1O43747 822 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 LPOP22079 712 aaPredicted RBP5.34□□□□□ -1.55
VPS13A-209ENST00000467124 SDHAP31040 664 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 FXR1P51114 621 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS13A-209ENST00000467124 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
VPS13A-209ENST00000467124 CDK17Q00537 523 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 SLC6A3Q01959 620 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 GRM3Q14832 879 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 RAB3GAP1Q15042 981 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 UGT8Q16880 541 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 PHF19Q5T6S3 580 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 IFIT1BQ5T764 474 aaKnown RBP5.34□□□□□ -1.55
VPS13A-209ENST00000467124 NME9Q86XW9 330 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 FERMT2Q96AC1 680 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 MPHOSPH6Q99547 160 aaKnown RBP5.34□□□□□ -1.55
VPS13A-209ENST00000467124 PCGF6Q9BYE7 350 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 SLC12A5Q9H2X9 1139 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 NGRNQ9NPE2 291 aaKnown RBP5.34□□□□□ -1.55
VPS13A-209ENST00000467124 HSPBP1Q9NZL4 362 aa5.34□□□□□ -1.55
VPS13A-209ENST00000467124 USP36Q9P275 1121 aaKnown RBP5.34□□□□□ -1.55
VPS13A-209ENST00000467124 UBA6A0AVT1 1052 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-209ENST00000467124 OR14I1A6ND48 311 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 PRPF6O94906 941 aaKnown RBP5.33□□□□□ -1.56
VPS13A-209ENST00000467124 MYL1P05976 194 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 ASGR2P07307 311 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 ENPP1P22413 925 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 THBS2P35442 1172 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 RGS3P49796 1198 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 HERVK_113P62684 666 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 PRR5P85299 388 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 KIF23Q02241 960 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-209ENST00000467124 MYBPC3Q14896 1274 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 EPHA7Q15375 998 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS13A-209ENST00000467124 MINDY4Q4G0A6 757 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 PITRM1Q5JRX3 1037 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 TMEM240Q5SV17 173 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 ADGRF1Q5T601 910 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 CXorf57Q6NSI4 855 aaKnown RBP5.33□□□□□ -1.56
VPS13A-209ENST00000467124 LRSAM1Q6UWE0 723 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 ESPNLQ6ZVH7 1005 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 RTN4RL1Q86UN2 441 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-209ENST00000467124 MIB1Q86YT6 1006 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 FOXRED1Q96CU9 486 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-209ENST00000467124 CAMKK2Q96RR4 588 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 SYT3Q9BQG1 590 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 ZFP64Q9NPA5 681 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 DPP7Q9UHL4 492 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 SERPINB13Q9UIV8 391 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 GPR45Q9Y5Y3 372 aa5.33□□□□□ -1.56
VPS13A-209ENST00000467124 FRMPD2Q68DX3 1309 aaPredicted RBP5.32□□□□□ -1.56
VPS13A-209ENST00000467124 TRIM75PA6NK02 468 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 PLIN1O60240 522 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 PCDH8O95206 1070 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 GLI1P08151 1106 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 FAHP16930 419 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 AGXTP21549 392 aa5.32□□□□□ -1.56
VPS13A-209ENST00000467124 CYP2C19P33261 490 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms