RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 ZNF484Q5JVG2 852 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 IER5Q5VY09 327 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 FAM117BQ6P1L5 589 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 B3GNT9Q6UX72 402 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 RDM1Q8NG50 284 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 TNFRSF25Q93038 417 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
TMCO3-205ENST00000465556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
TMCO3-205ENST00000465556 C22orf31O95567 290 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 MMP1P03956 469 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 OATP04181 439 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 KLRC1P26715 233 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 PPP4R3AQ6IN85 833 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 TRMT1LQ7Z2T5 733 aaKnown RBP13.55□□□□□ -0.24
TMCO3-205ENST00000465556 MIER3Q7Z3K6 550 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 SPRED2Q7Z698 418 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 RAD9AQ99638 391 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 MYO7AQ13402 2215 aa13.55□□□□□ -0.24
TMCO3-205ENST00000465556 NCOR1O75376 2440 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 EPOPA6NHQ4 379 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 CCNT1O60563 726 aaKnown RBP13.54□□□□□ -0.24
TMCO3-205ENST00000465556 CD52P31358 61 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 TRIM29Q14134 588 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 RABEP1Q15276 862 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 KRT40Q6A162 431 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 DIS3L2Q8IYB7 885 aaKnown RBP13.54□□□□□ -0.24
TMCO3-205ENST00000465556 USP38Q8NB14 1042 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 SLC17A8Q8NDX2 589 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
TMCO3-205ENST00000465556 LLPHQ9BRT6 129 aaKnown RBP13.54□□□□□ -0.24
TMCO3-205ENST00000465556 AGO3Q9H9G7 860 aaKnown RBP13.54□□□□□ -0.24
TMCO3-205ENST00000465556 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 SH2B1Q9NRF2 756 aaPredicted RBP13.54□□□□□ -0.24
TMCO3-205ENST00000465556 VAV3Q9UKW4 847 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 SQORQ9Y6N5 450 aa13.54□□□□□ -0.24
TMCO3-205ENST00000465556 TTC28Q96AY4 2481 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 HTRA4P83105 476 aaPredicted RBP13.53□□□□□ -0.24
TMCO3-205ENST00000465556 PPP2R5CQ13362 524 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 KIAA0319LQ8IZA0 1049 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 NME8Q8N427 588 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 ZSCAN31Q96LW9 406 aaPredicted RBP13.53□□□□□ -0.24
TMCO3-205ENST00000465556 FAM20AQ96MK3 541 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
TMCO3-205ENST00000465556 SEPT9Q9UHD8 586 aaPredicted RBP13.53□□□□□ -0.24
TMCO3-205ENST00000465556 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
TMCO3-205ENST00000465556 VCANP13611 3396 aa13.52□□□□□ -0.24
TMCO3-205ENST00000465556 BTBD18B2RXH4 712 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 TBX3O15119 743 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 MAGEB2O15479 319 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 IGFBP4P22692 258 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 CLCN3P51790 818 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 HMGN5P82970 282 aaKnown RBP13.52□□□□□ -0.25
TMCO3-205ENST00000465556 PAK2Q13177 524 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 METTL13Q8N6R0 699 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
TMCO3-205ENST00000465556 ARNTL2Q8WYA1 636 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 HAS1Q92839 578 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 TOP1MTQ969P6 601 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 PPP1R16BQ96T49 567 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 YME1L1Q96TA2 773 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 UPF2Q9HAU5 1272 aaKnown RBP13.52□□□□□ -0.25
TMCO3-205ENST00000465556 GINS2Q9Y248 185 aa13.52□□□□□ -0.25
TMCO3-205ENST00000465556 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 EML1O00423 815 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 WNT7AO00755 349 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 UPP2O95045 317 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 VTNP04004 478 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 TMEM266Q2M3C6 531 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
TMCO3-205ENST00000465556 LRRC71Q8N4P6 559 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 BANK1Q8NDB2 785 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 GDPD5Q8WTR4 605 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 TMEM40Q8WWA1 233 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 TGS1Q96RS0 853 aaKnown RBP13.51□□□□□ -0.25
TMCO3-205ENST00000465556 MAP7D2Q96T17 732 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 FTHL17Q9BXU8 183 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 NRBP2Q9NSY0 501 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
TMCO3-205ENST00000465556 SPTBN5Q9NRC6 3674 aaKnown RBP13.51□□□□□ -0.25
TMCO3-205ENST00000465556 ADGRA3Q8IWK6 1321 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 TMEM150BA6NC51 233 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 RFXAPO00287 272 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 ST18O60284 1047 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 NEMFO60524 1076 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 ERVK-21P61565 698 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 PSMC5P62195 406 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 SPIRE1Q08AE8 756 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 TBC1D8BQ0IIM8 1120 aa13.5□□□□□ -0.25
TMCO3-205ENST00000465556 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms