RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 EXTL1Q92935 676 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 NBPF4Q96M43 638 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 DPYSL5Q9BPU6 564 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 BTBD2Q9BX70 525 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 NR2E1Q9Y466 385 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 SLC30A1Q9Y6M5 507 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 ARID4BQ4LE39 1312 aaPredicted RBP4.41□□□□□ -1.7
SNX4-202ENST00000465505 CCDC85CA6NKD9 419 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 CDC14BO60729 498 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 HMGCRP04035 888 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 ACO1P21399 889 aaKnown RBP4.4□□□□□ -1.71
SNX4-202ENST00000465505 MC4RP32245 332 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 ADCY8P40145 1251 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 ECE1P42892 770 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 DNM2P50570 870 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 KCNQ1P51787 676 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 CD83Q01151 205 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 NRN1LQ496H8 165 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 GLIPR1L2Q4G1C9 344 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 USP39Q53GS9 565 aaKnown RBP4.4□□□□□ -1.71
SNX4-202ENST00000465505 NAALADL2Q58DX5 795 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 FAM47CQ5HY64 1035 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 KANK2Q63ZY3 851 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 IGFL4Q6B9Z1 124 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 MAMDC4Q6UXC1 1216 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 POLNQ7Z5Q5 900 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 ZC3H7AQ8IWR0 971 aaKnown RBP4.4□□□□□ -1.71
SNX4-202ENST00000465505 IPO4Q8TEX9 1081 aaKnown RBP4.4□□□□□ -1.71
SNX4-202ENST00000465505 PLA2G12BQ9BX93 195 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 ZNF341Q9BYN7 854 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 UCKL1Q9NWZ5 548 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 SIRPGQ9P1W8 387 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 ING1Q9UK53 422 aaPredicted RBP4.4□□□□□ -1.71
SNX4-202ENST00000465505 FBXO10Q9UK96 956 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 CDC42EP3Q9UKI2 254 aa4.4□□□□□ -1.71
SNX4-202ENST00000465505 MRPS23Q9Y3D9 190 aaKnown RBP4.4□□□□□ -1.71
SNX4-202ENST00000465505 A0A0U1RQG5 324 aaPredicted RBP4.39□□□□□ -1.71
SNX4-202ENST00000465505 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.39□□□□□ -1.71
SNX4-202ENST00000465505 PRAMEF25A6NGN4 478 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 ARHGAP6O43182 974 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 PTMSP20962 102 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 ZC3H6P61129 1189 aaKnown RBP4.39□□□□□ -1.71
SNX4-202ENST00000465505 LRSAM1Q6UWE0 723 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 USP30Q70CQ3 517 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 DNAJC2Q99543 621 aaKnown RBP4.39□□□□□ -1.71
SNX4-202ENST00000465505 MENTQ9BUN1 341 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 KIAA1683Q9H0B3 1180 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 C12orf65Q9H3J6 166 aaKnown RBP4.39□□□□□ -1.71
SNX4-202ENST00000465505 SLITRK6Q9H5Y7 841 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 USP35Q9P2H5 1018 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 PPP1R1BQ9UD71 204 aaPredicted RBP4.39□□□□□ -1.71
SNX4-202ENST00000465505 KDM2BQ8NHM5 1336 aa4.39□□□□□ -1.71
SNX4-202ENST00000465505 A0A0G2JNJ9 132 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 PPM1GO15355 546 aaPredicted RBP4.38□□□□□ -1.71
SNX4-202ENST00000465505 MMEP08473 750 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 ATP2B1P20020 1258 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 RPS19P39019 145 aaKnown RBP4.38□□□□□ -1.71
SNX4-202ENST00000465505 ANAPC15P60006 121 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 FOXL1Q12952 345 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 SERINC3Q13530 473 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 PCOLCEQ15113 449 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 TM4SF20Q53R12 229 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 TMEM200BQ69YZ2 307 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 NOSTRINQ8IVI9 506 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 EXOC8Q8IYI6 725 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 CNPY4Q8N129 248 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 GSTCDQ8NEC7 633 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 SLC7A14Q8TBB6 771 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 ASB15Q8WXK1 588 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 OR14A2Q96R54 314 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 OR10A5Q9H207 317 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 SLC52A2Q9HAB3 445 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 MSL2Q9HCI7 577 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 PLA2G3Q9NZ20 509 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 Q9UFV3 132 aa4.38□□□□□ -1.71
SNX4-202ENST00000465505 PUF60Q9UHX1 559 aaKnown RBP4.38□□□□□ -1.71
SNX4-202ENST00000465505 FAM221BA6H8Z2 402 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 PLEKHD1A6NEE1 506 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 RASSF10A6NK89 507 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 SCDO00767 359 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 NARSO43776 548 aaKnown RBP4.37□□□□□ -1.71
SNX4-202ENST00000465505 KCNA6P17658 529 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 MRE11P49959 708 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 DGCR2P98153 550 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 HGFACQ04756 655 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 RBL2Q08999 1139 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 MOGSQ13724 837 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 RASA3Q14644 834 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 HSP90AB4PQ58FF6 505 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 TRIM61Q5EBN2 209 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 ZC3H12BQ5HYM0 836 aaKnown RBP4.37□□□□□ -1.71
SNX4-202ENST00000465505 FSTL4Q6MZW2 842 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 OTOP2Q7RTS6 562 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 LRP10Q7Z4F1 713 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 FILIP1Q7Z7B0 1213 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 C1orf210Q8IVY1 113 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 GPR135Q8IZ08 494 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 CISD2Q8N5K1 135 aaKnown RBP4.37□□□□□ -1.71
SNX4-202ENST00000465505 IL17DQ8TAD2 202 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 DLG3Q92796 817 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms