RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 TC2NQ8N9U0 490 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 ZNF280CQ8ND82 737 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 ANKRD20A12PQ8NF67 263 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 IL31RAQ8NI17 732 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 NOC3LQ8WTT2 800 aaKnown RBP9.21□□□□□ -0.94
UBE4B-205ENST00000465408 CPLX3Q8WVH0 158 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 SLC5A5Q92911 643 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 EEF2KMTQ96G04 330 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 EIF2AK1Q9BQI3 630 aaKnown RBP9.21□□□□□ -0.94
UBE4B-205ENST00000465408 THAP9Q9H5L6 903 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 SLC38A10Q9HBR0 1119 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 PANK4Q9NVE7 773 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 RGL1Q9NZL6 768 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 PKD2L1Q9P0L9 805 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 TBC1D7Q9P0N9 293 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 MAGEC2Q9UBF1 373 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-205ENST00000465408 ZHX2Q9Y6X8 837 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 ATAD5Q96QE3 1844 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 NCOR2Q9Y618 2525 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 BICDL2A1A5D9 508 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 AKR1B15C9JRZ8 316 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 PES1O00541 588 aaKnown RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 TNNT1P13805 278 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 EEF1GP26641 437 aaKnown RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 PBX2P40425 430 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 PPP1R2P41236 205 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 ATN1P54259 1190 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 HMGCS2P54868 508 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 SLC12A3P55017 1021 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 BACE1P56817 501 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 EHHADHQ08426 723 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 RBL2Q08999 1139 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 PABPC4Q13310 644 aaKnown RBP eCLIP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 PPIL2Q13356 520 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 MOGSQ13724 837 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 CTTNQ14247 550 aaKnown RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 CEP55Q53EZ4 464 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 COBLL1Q53SF7 1204 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 ARSHQ5FYA8 562 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 FAM26FQ5R3K3 315 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 E4F1Q66K89 784 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 TMEM139Q8IV31 216 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 CCDC65Q8IXS2 484 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 MICALL1Q8N3F8 863 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 CCDC112Q8NEF3 446 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 SYTL5Q8TDW5 730 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 DYDC2Q96IM9 177 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 PPP1R13BQ96KQ4 1090 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 CNOT6LQ96LI5 555 aaKnown RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 FGFBP2Q9BYJ0 223 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 GTPBP4Q9BZE4 634 aaKnown RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 SENP6Q9GZR1 1112 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 TMX1Q9H3N1 280 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 UNC45AQ9H3U1 944 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 ZHX3Q9H4I2 956 aa9.2□□□□□ -0.94
UBE4B-205ENST00000465408 BMP2KQ9NSY1 1161 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-205ENST00000465408 UQCRHLA0A096LP55 91 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 LRRC10BA6NIK2 292 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 LGALS16A8MUM7 142 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 B4DLN1 442 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 DDX39AO00148 427 aaKnown RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 GAS7O60861 476 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MFAP3LO75121 409 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 PSMD10O75832 226 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 UQCRHP07919 91 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 EIF2AK2P19525 551 aaKnown RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 RPA1P27694 616 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MTIF2P46199 727 aaKnown RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 RTP1P59025 263 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 UBXN1Q04323 297 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 PSMD2Q13200 908 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 CENPPQ6IPU0 288 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 NSMFQ6X4W1 530 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MCF2L2Q86YR7 1114 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MYOCDQ8IZQ8 938 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 GUF1Q8N442 669 aaKnown RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MB21D1Q8N884 522 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 PRSS33Q8NF86 280 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 PURBQ96QR8 312 aaKnown RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 TAAR1Q96RJ0 339 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 PARK7Q99497 189 aaKnown RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 BAG1Q99933 345 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MXRA8Q9BRK3 442 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 ZNF577Q9BSK1 485 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 POLR3CQ9BUI4 534 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 PRDM5Q9NQX1 630 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-205ENST00000465408 RNF146Q9NTX7 359 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 DNM3Q9UQ16 869 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 STK24Q9Y6E0 443 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MYO15AQ9UKN7 3530 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 DOCK1Q14185 1865 aa9.19□□□□□ -0.94
UBE4B-205ENST00000465408 MED19A0JLT2 244 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 VWA5AO00534 786 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 NKRFO15226 690 aaKnown RBP eCLIP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 EYA4O95677 639 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms