RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 UBIAD1Q9Y5Z9 338 aa18.65■□□□□ 0.58
YIPF3-205ENST00000460547 NKRFO15226 690 aaKnown RBP eCLIP18.64■□□□□ 0.57
YIPF3-205ENST00000460547 RRP9O43818 475 aaKnown RBP18.64■□□□□ 0.57
YIPF3-205ENST00000460547 TBCAO75347 108 aaKnown RBP18.64■□□□□ 0.57
YIPF3-205ENST00000460547 ALAS1P13196 640 aa18.64■□□□□ 0.57
YIPF3-205ENST00000460547 RINT1Q6NUQ1 792 aa18.64■□□□□ 0.57
YIPF3-205ENST00000460547 WDR59Q6PJI9 974 aa18.64■□□□□ 0.57
YIPF3-205ENST00000460547 ZNF397Q8NF99 534 aaPredicted RBP18.64■□□□□ 0.57
YIPF3-205ENST00000460547 NACC1Q96RE7 527 aa18.64■□□□□ 0.57
YIPF3-205ENST00000460547 TBC1D7Q9P0N9 293 aa18.64■□□□□ 0.57
YIPF3-205ENST00000460547 NDUFA10O95299 355 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 CASQ1P31415 396 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 OAZ1P54368 228 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 FCGRTP55899 365 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 CAP1Q01518 475 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 CTTNQ14247 550 aaKnown RBP18.63■□□□□ 0.57
YIPF3-205ENST00000460547 C1orf186Q6ZWK4 172 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 TRIM59Q8IWR1 403 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 WDR24Q96S15 920 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 ZNHIT6Q9NWK9 470 aaKnown RBP18.63■□□□□ 0.57
YIPF3-205ENST00000460547 EPN1Q9Y6I3 576 aaPredicted RBP18.63■□□□□ 0.57
YIPF3-205ENST00000460547 VWA5AO00534 786 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 PDXKO00764 312 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 EIF3DO15371 548 aaKnown RBP eCLIP18.63■□□□□ 0.57
YIPF3-205ENST00000460547 KIF5CO60282 957 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 KLK7P49862 253 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 RBM10P98175 930 aaKnown RBP18.63■□□□□ 0.57
YIPF3-205ENST00000460547 RAD51AP2Q09MP3 1159 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 KNOP1Q1ED39 458 aaKnown RBP18.63■□□□□ 0.57
YIPF3-205ENST00000460547 CCDC40Q4G0X9 1142 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 MUM1L1Q5H9M0 696 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 ZNF662Q6ZS27 426 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 NELFCDQ8IXH7 590 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 CCDC170Q8IYT3 715 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 CPXCR1Q8N123 301 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 ACRBPQ8NEB7 543 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 IL31RAQ8NI17 732 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 CHP1Q99653 195 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 MAF1Q9H063 256 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 JADE2Q9NQC1 790 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 AGPAT5Q9NUQ2 364 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 MYO1AQ9UBC5 1043 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 SEL1LQ9UBV2 794 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 FAM184BQ9ULE4 1060 aa18.63■□□□□ 0.57
YIPF3-205ENST00000460547 LOXHD1Q8IVV2 1947 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 UBE4BO95155 1302 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 CHMP2AO43633 222 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 CASP5P51878 434 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 ZNF131P52739 623 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 PRMT2P55345 433 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 FAM110CQ1W6H9 321 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 TKFCQ3LXA3 575 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 XRRA1Q6P2D8 792 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 TPH2Q8IWU9 490 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 REPS2Q8NFH8 660 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 PCMTD1Q96MG8 357 aaPredicted RBP18.62■□□□□ 0.57
YIPF3-205ENST00000460547 ZHX3Q9H4I2 956 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 KCNH7Q9NS40 1196 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 ODF2LQ9ULJ1 636 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 ADAMTS5Q9UNA0 930 aa18.62■□□□□ 0.57
YIPF3-205ENST00000460547 CTDP1Q9Y5B0 961 aaPredicted RBP18.62■□□□□ 0.57
YIPF3-205ENST00000460547 CETN3O15182 167 aa18.61■□□□□ 0.57
YIPF3-205ENST00000460547 ARHGAP25P42331 645 aa18.61■□□□□ 0.57
YIPF3-205ENST00000460547 HERVK_113P62684 666 aa18.61■□□□□ 0.57
YIPF3-205ENST00000460547 RPS6P62753 249 aaKnown RBP18.61■□□□□ 0.57
YIPF3-205ENST00000460547 PPP2R3AQ06190 1150 aa18.61■□□□□ 0.57
YIPF3-205ENST00000460547 ARHGAP29Q52LW3 1261 aa18.61■□□□□ 0.57
YIPF3-205ENST00000460547 AGO4Q9HCK5 861 aaKnown RBP18.61■□□□□ 0.57
YIPF3-205ENST00000460547 TYW1Q9NV66 732 aaKnown RBP18.61■□□□□ 0.57
YIPF3-205ENST00000460547 PLAGL2Q9UPG8 496 aa18.61■□□□□ 0.57
YIPF3-205ENST00000460547 REXO2Q9Y3B8 237 aaKnown RBP18.61■□□□□ 0.57
YIPF3-205ENST00000460547 RLFQ13129 1914 aa18.61■□□□□ 0.57
YIPF3-205ENST00000460547 PTPRFP10586 1907 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 RSPH10B2B2RC85 870 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 DHX15O43143 795 aaKnown RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 CALUO43852 315 aaPredicted RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 RSPH10BP0C881 870 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 GUCY2CP25092 1073 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 HOXD13P35453 343 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 CYLC1P35663 651 aaPredicted RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 MRPS9P82933 396 aaKnown RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 NFIL3Q16649 462 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 CATSPERGQ6ZRH7 1159 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 PIGOQ8TEQ8 1089 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 GTF3C2Q8WUA4 911 aaPredicted RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 ATG4CQ96DT6 458 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 LXNQ9BS40 222 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 LZTFL1Q9NQ48 299 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 MYPNQ86TC9 1320 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 EIF3CLB5ME19 914 aaKnown RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 TNPO2O14787 897 aaKnown RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 ATP2A1O14983 1001 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 URI1O94763 535 aaPredicted RBP18.6■□□□□ 0.57
YIPF3-205ENST00000460547 FAM13AO94988 1023 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 LYPLA2O95372 231 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 CTGFP29279 349 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 KRT83P78385 493 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 ADAM9Q13443 819 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 SLC30A10Q6XR72 485 aa18.6■□□□□ 0.57
YIPF3-205ENST00000460547 TRERF1Q96PN7 1200 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms