RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 CHMP2AO43633 222 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 C22orf31O95567 290 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 GCFC2P16383 781 aaKnown RBP18.61■□□□□ 0.57
SHANK2-213ENST00000460048 TMEM62Q0P6H9 643 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 UGCGQ16739 394 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 PIK3AP1Q6ZUJ8 805 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.61■□□□□ 0.57
SHANK2-213ENST00000460048 KIAA0319LQ8IZA0 1049 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 SP7Q8TDD2 431 aaPredicted RBP18.61■□□□□ 0.57
SHANK2-213ENST00000460048 FAM167AQ96KS9 214 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 CELF4Q9BZC1 486 aaKnown RBP18.61■□□□□ 0.57
SHANK2-213ENST00000460048 KCNMB3Q9NPA1 279 aa18.61■□□□□ 0.57
SHANK2-213ENST00000460048 CUL9Q8IWT3 2517 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 LINC01553A4QN01 128 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 M0QZ92 97 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 RFXAPO00287 272 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 POU3F3P20264 500 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-213ENST00000460048 IGFBP4P22692 258 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 KRT2P35908 639 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 RBM25P49756 843 aaKnown RBP18.6■□□□□ 0.57
SHANK2-213ENST00000460048 NR5A1Q13285 461 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 MIER3Q7Z3K6 550 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 ARNTL2Q8WYA1 636 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 CEP131Q9UPN4 1083 aa18.6■□□□□ 0.57
SHANK2-213ENST00000460048 PRRC2BQ5JSZ5 2229 aaKnown RBP18.59■□□□□ 0.57
SHANK2-213ENST00000460048 FAM205CA6NFA0 338 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 ENPP3O14638 875 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 MMP1P03956 469 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 OATP04181 439 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 CD52P31358 61 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 ERVK-21P61565 698 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 PRKCEQ02156 737 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 TRMT1LQ7Z2T5 733 aaKnown RBP18.59■□□□□ 0.57
SHANK2-213ENST00000460048 FAM20AQ96MK3 541 aa18.59■□□□□ 0.57
SHANK2-213ENST00000460048 NAP1L4Q99733 375 aaKnown RBP18.59■□□□□ 0.57
SHANK2-213ENST00000460048 REV3LO60673 3130 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 TBX3O15119 743 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 MAGEB2O15479 319 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 CCNT1O60563 726 aaKnown RBP18.58■□□□□ 0.56
SHANK2-213ENST00000460048 STBD1O95210 358 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 PPP2R5CQ13362 524 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 CCDC83Q8IWF9 413 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 LINC01465Q8N7H1 131 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 LINC01599Q8WXQ3 324 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 TGS1Q96RS0 853 aaKnown RBP18.58■□□□□ 0.56
SHANK2-213ENST00000460048 CDHR5Q9HBB8 845 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 BRMS1Q9HCU9 246 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 NRBP2Q9NSY0 501 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 VAV3Q9UKW4 847 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 PADI3Q9ULW8 664 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 A0A0C4DFX4 3053 aa18.58■□□□□ 0.56
SHANK2-213ENST00000460048 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 LPXNO60711 386 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 UPP2O95045 317 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 TARBP2Q15633 366 aaKnown RBP18.57■□□□□ 0.56
SHANK2-213ENST00000460048 KRT40Q6A162 431 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 RTN4RL1Q86UN2 441 aaPredicted RBP18.57■□□□□ 0.56
SHANK2-213ENST00000460048 HAS1Q92839 578 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 ZSCAN31Q96LW9 406 aaPredicted RBP18.57■□□□□ 0.56
SHANK2-213ENST00000460048 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
SHANK2-213ENST00000460048 FTHL17Q9BXU8 183 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 MTCH2Q9Y6C9 303 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 ARID2Q68CP9 1835 aa18.57■□□□□ 0.56
SHANK2-213ENST00000460048 KIAA1671Q9BY89 1806 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 EML1O00423 815 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 PAK2Q13177 524 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 GRB10Q13322 594 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 DIS3L2Q8IYB7 885 aaKnown RBP18.56■□□□□ 0.56
SHANK2-213ENST00000460048 TMEM40Q8WWA1 233 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 PPM1EQ8WY54 764 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 CEP89Q96ST8 783 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 YME1L1Q96TA2 773 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 NIFKQ9BYG3 293 aaKnown RBP18.56■□□□□ 0.56
SHANK2-213ENST00000460048 SUGCTQ9HAC7 445 aa18.56■□□□□ 0.56
SHANK2-213ENST00000460048 ATG2AQ2TAZ0 1938 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 FNDC1Q4ZHG4 1894 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-213ENST00000460048 GPR32O75388 356 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 VTNP04004 478 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 CLCN3P51790 818 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 FOSBP53539 338 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 CRYBB1P53674 252 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-213ENST00000460048 TRIM29Q14134 588 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 XKR3Q5GH77 459 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 EFCAB12Q6NXP0 572 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 FAM43BQ6ZT52 329 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-213ENST00000460048 CRIPAKQ8N1N5 446 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 TMX1Q9H3N1 280 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 RC3H2Q9HBD1 1191 aaKnown RBP18.55■□□□□ 0.56
SHANK2-213ENST00000460048 ERVK-5Q9HDB9 667 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 PRDM6Q9NQX0 595 aa18.55■□□□□ 0.56
SHANK2-213ENST00000460048 SH2B1Q9NRF2 756 aaPredicted RBP18.55■□□□□ 0.56
SHANK2-213ENST00000460048 NOC2LQ9Y3T9 749 aaKnown RBP18.55■□□□□ 0.56
SHANK2-213ENST00000460048 PSMC5P62195 406 aa18.54■□□□□ 0.56
SHANK2-213ENST00000460048 SPIRE1Q08AE8 756 aa18.54■□□□□ 0.56
SHANK2-213ENST00000460048 CCDC85BQ15834 202 aaPredicted RBP18.54■□□□□ 0.56
SHANK2-213ENST00000460048 KIZQ2M2Z5 673 aa18.54■□□□□ 0.56
SHANK2-213ENST00000460048 TMEM266Q2M3C6 531 aa18.54■□□□□ 0.56
SHANK2-213ENST00000460048 LRRC71Q8N4P6 559 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms