RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 LMCD1Q9NZU5 365 aa14.01□□□□□ -0.17
VEGFA-210ENST00000457104 GABBR1Q9UBS5 961 aa14.01□□□□□ -0.17
VEGFA-210ENST00000457104 PADI3Q9ULW8 664 aa14.01□□□□□ -0.17
VEGFA-210ENST00000457104 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
VEGFA-210ENST00000457104 STK36Q9NRP7 1315 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 ZNF862O60290 1169 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 PSMD10O75832 226 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 TDP2O95551 362 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 C22orf31O95567 290 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 LINC00271P0C7V0 271 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 MRPS5P82675 430 aaKnown RBP14□□□□□ -0.17
VEGFA-210ENST00000457104 EPC2Q52LR7 807 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 B3GNT9Q6UX72 402 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 C22orf23Q9BZE7 217 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 UNC45AQ9H3U1 944 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 RC3H2Q9HBD1 1191 aaKnown RBP14□□□□□ -0.17
VEGFA-210ENST00000457104 DISC1Q9NRI5 854 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 SAMM50Q9Y512 469 aa14□□□□□ -0.17
VEGFA-210ENST00000457104 WDR64B1ANS9 1081 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 M0QZ92 97 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 GAS7O60861 476 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 CDKL5O76039 1030 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 LARGE1O95461 756 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 FDPSP14324 419 aaKnown RBP13.99□□□□□ -0.17
VEGFA-210ENST00000457104 TFF2Q03403 129 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 UGCGQ16739 394 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 ME3Q16798 604 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
VEGFA-210ENST00000457104 CKAP2LQ8IYA6 745 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 FBXO22Q8NEZ5 403 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 ETNPPLQ8TBG4 499 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 TMEM40Q8WWA1 233 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 SYMPKQ92797 1274 aaKnown RBP13.99□□□□□ -0.17
VEGFA-210ENST00000457104 ZNF689Q96CS4 500 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-210ENST00000457104 TMX1Q9H3N1 280 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 MYO7AQ13402 2215 aa13.99□□□□□ -0.17
VEGFA-210ENST00000457104 SFNP31947 248 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 NONOQ15233 471 aaKnown RBP eCLIP13.98□□□□□ -0.173e-6■■■□□ 16.3
VEGFA-210ENST00000457104 ANKRD1Q15327 319 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 INF2Q27J81 1249 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 TMEM266Q2M3C6 531 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 MOXD1Q6UVY6 613 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 KRT25Q7Z3Z0 450 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 TMEM192Q8IY95 271 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 LINC01465Q8N7H1 131 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 SAMD11Q96NU1 681 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 TEKT3Q9BXF9 490 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-210ENST00000457104 TCEAL9Q9UHQ7 104 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 NOC2LQ9Y3T9 749 aaKnown RBP13.98□□□□□ -0.17
VEGFA-210ENST00000457104 BDP1A6H8Y1 2624 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 NCOR1O75376 2440 aa13.98□□□□□ -0.17
VEGFA-210ENST00000457104 PLXNA4Q9HCM2 1894 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 ARID2Q68CP9 1835 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 H3BNC9 293 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 CHMP2AO43633 222 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 SLC37A4O43826 429 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 MGEA5O60502 916 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 GPR32O75388 356 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 DGKIO75912 1065 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 STBD1O95210 358 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 VTNP04004 478 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 OATP04181 439 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-210ENST00000457104 BMP1P13497 986 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 JAK3P52333 1124 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 PRKCEQ02156 737 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 PAK2Q13177 524 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 SKIV2LQ15477 1246 aaKnown RBP13.97□□□□□ -0.17
VEGFA-210ENST00000457104 GTF3C6Q969F1 213 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 FAM167AQ96KS9 214 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 FTHL17Q9BXU8 183 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 ERVK-5Q9HDB9 667 aa13.97□□□□□ -0.17
VEGFA-210ENST00000457104 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-210ENST00000457104 ADGRA3Q8IWK6 1321 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 KCNQ1P51787 676 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 CLCN3P51790 818 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 NEK4P51957 841 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 CRYBB1P53674 252 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-210ENST00000457104 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.17
VEGFA-210ENST00000457104 KIZQ2M2Z5 673 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 EARS2Q5JPH6 523 aaKnown RBP13.96□□□□□ -0.17
VEGFA-210ENST00000457104 FIBCD1Q8N539 461 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 RDM1Q8NG50 284 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 CLP1Q92989 425 aaKnown RBP13.96□□□□□ -0.17
VEGFA-210ENST00000457104 MRPL38Q96DV4 380 aaKnown RBP13.96□□□□□ -0.17
VEGFA-210ENST00000457104 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 PPP1R16BQ96T49 567 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 DDX25Q9UHL0 483 aaKnown RBP13.96□□□□□ -0.17
VEGFA-210ENST00000457104 COG5Q9UP83 839 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 CEP131Q9UPN4 1083 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 GINS2Q9Y248 185 aa13.96□□□□□ -0.17
VEGFA-210ENST00000457104 C5orf42Q9H799 3197 aa13.95□□□□□ -0.18
VEGFA-210ENST00000457104 CCDC194A0A1B0GVG4 234 aa13.95□□□□□ -0.18
VEGFA-210ENST00000457104 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
VEGFA-210ENST00000457104 C5orf67F2Z3F1 127 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms