RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CTAGE1Q96RT6 745 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 PLAGL2Q9UPG8 496 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 EIF3DO15371 548 aaKnown RBP eCLIP7.3□□□□□ -1.24
USP46-202ENST00000451218 MKRN3Q13064 507 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 TARBP2Q15633 366 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 NOC3LQ8WTT2 800 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 NDST4Q9H3R1 872 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 RNF146Q9NTX7 359 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 REV3LO60673 3130 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 CDH23Q9H251 3354 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 PSMA7O14818 248 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 PTMAP06454 111 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 ZSCAN20P17040 1043 aaPredicted RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 EIF2AK2P19525 551 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 USP14P54578 494 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 SYCP1Q15431 976 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 ZRSR1Q15695 479 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 SNRNP48Q6IEG0 339 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 MAFBQ9Y5Q3 323 aaPredicted RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 DUSP10Q9Y6W6 482 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 TSC2P49815 1807 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 ABLIM1O14639 778 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 ADCY6O43306 1168 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 PRPF6O94906 941 aaKnown RBP7.29□□□□□ -1.24
USP46-202ENST00000451218 ALAS1P13196 640 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 MAP3K9P80192 1104 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 KNOP1Q1ED39 458 aaKnown RBP7.29□□□□□ -1.24
USP46-202ENST00000451218 IRF2BP2Q7Z5L9 587 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 C4orf19Q8IY42 314 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 CEP63Q96MT8 703 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 SH2D3AQ9BRG2 576 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 TANGO6Q9C0B7 1094 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 TAF1DQ9H5J8 278 aaPredicted RBP7.29□□□□□ -1.24
USP46-202ENST00000451218 HOMER2Q9NSB8 354 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 ZNF446Q9NWS9 450 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 RABGAP1Q9Y3P9 1069 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 SOX10P56693 466 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 GTF2BQ00403 316 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 MTMR1Q13613 665 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 CBWD6Q4V339 395 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 CBWD3Q5JTY5 395 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 CBWD5Q5RIA9 395 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 HAUS3Q68CZ6 603 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 SLC9A9Q8IVB4 645 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 MYOCDQ8IZQ8 938 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 GPRC5CQ9NQ84 441 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 ZC3H4Q9UPT8 1303 aaKnown RBP7.29□□□□□ -1.24
USP46-202ENST00000451218 TNNT1P13805 278 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 DLG4P78352 724 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 DCAF15Q66K64 600 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 RNF207Q6ZRF8 634 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 PROCA1Q8NCQ7 364 aaPredicted RBP7.29□□□□□ -1.24
USP46-202ENST00000451218 PTPN18Q99952 460 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 NTPCRQ9BSD7 190 aaKnown RBP7.29□□□□□ -1.24
USP46-202ENST00000451218 KCND2Q9NZV8 630 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 UQCRHLA0A096LP55 91 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 GRXCR2A6NFK2 248 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 PDXKO00764 312 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 HIP1RO75146 1068 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 UQCRHP07919 91 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 DNM2P50570 870 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 UBXN1Q04323 297 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 PPATQ06203 517 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 MAN2A1Q16706 1144 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 CCDC62Q6P9F0 684 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 USP50Q70EL3 339 aaPredicted RBP7.29□□□□□ -1.24
USP46-202ENST00000451218 C12orf56Q8IXR9 622 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 CPXCR1Q8N123 301 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 GPRASP2Q96D09 838 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 TRIM47Q96LD4 638 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 RMDN3Q96TC7 470 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 COL4A3BPQ9Y5P4 624 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 MRFAP1Q9Y605 127 aa7.29□□□□□ -1.24
USP46-202ENST00000451218 GSTTP1A0A1W2PQM5 241 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 GLTPD2A6NH11 291 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 TTLL13PA6NNM8 815 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 NR3C2P08235 984 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 ERCC3P19447 782 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 ETF1P62495 437 aaKnown RBP7.28□□□□□ -1.24
USP46-202ENST00000451218 AMPD3Q01432 767 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 CAP1Q01518 475 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 PLA2G4FQ68DD2 849 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 RSRC2Q7L4I2 434 aaKnown RBP7.28□□□□□ -1.24
USP46-202ENST00000451218 TMEM161BQ8NDZ6 487 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 CCDC51Q96ER9 411 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 ODF2LQ9ULJ1 636 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 BICDL2A1A5D9 508 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 CHMP2AO43633 222 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 FARP2O94887 1054 aaPredicted RBP7.28□□□□□ -1.24
USP46-202ENST00000451218 FDX1P10109 184 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 ALDH5A1P51649 535 aaPredicted RBP7.28□□□□□ -1.24
USP46-202ENST00000451218 SLC30A5Q8TAD4 765 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 ZC3H15Q8WU90 426 aaKnown RBP7.28□□□□□ -1.24
USP46-202ENST00000451218 FBXL18Q96ME1 805 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 RAB34Q9BZG1 259 aa7.28□□□□□ -1.24
USP46-202ENST00000451218 ASCC2Q9H1I8 757 aaPredicted RBP7.28□□□□□ -1.24
USP46-202ENST00000451218 AGPAT3Q9NRZ7 376 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms