RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 NCK2O43639 380 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 FXR1P51114 621 aaKnown RBP eCLIP11.23□□□□□ -0.61
CTC1-202ENST00000449476 TPD52P55327 224 aaPredicted RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 PSMD6Q15008 389 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 CIAPIN1Q6FI81 312 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 GSPT2Q8IYD1 628 aaKnown RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 NME8Q8N427 588 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 BANK1Q8NDB2 785 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 ZMYND12Q9H0C1 365 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 VCX3BQ9H321 246 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 TBK1Q9UHD2 729 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 CD2APQ9Y5K6 639 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 A0A087WUV0 522 aaPredicted RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 A6NJR5 290 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 DYNLT1P63172 113 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 MTMR1Q13613 665 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 PDZD4Q76G19 769 aaPredicted RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 RMDN3Q96TC7 470 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 CNOT10Q9H9A5 744 aaKnown RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 AKT3Q9Y243 479 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 SYNJ2BP-COX16A0A087WUM0 186 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 USP11P51784 963 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 OSTNP61366 133 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 RTKN2Q8IZC4 609 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 FAM149B1Q96BN6 582 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 APOL6Q9BWW8 343 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 CALN1Q9BXU9 219 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 COX16Q9P0S2 106 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 SNX24Q9Y343 169 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 CEP170BQ9Y4F5 1589 aaPredicted RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 MIF4GDA9UHW6 222 aaKnown RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 ATP1A1P05023 1023 aaKnown RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 PDIA5Q14554 519 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 NR1I3Q14994 352 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
CTC1-202ENST00000449476 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.23□□□□□ -0.61
CTC1-202ENST00000449476 ECE2O60344 883 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 MAP2K2P36507 400 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 PDCLQ13371 301 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 ARHGEF18Q6ZSZ5 1173 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 EDEM3Q9BZQ6 932 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 PLAAQ9Y263 795 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 MORC2Q9Y6X9 1032 aaPredicted RBP11.22□□□□□ -0.61
CTC1-202ENST00000449476 ESYT3A0FGR9 886 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 TMED2Q15363 201 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 TC2NQ8N9U0 490 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 MTMR4Q9NYA4 1195 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 DIP2AQ14689 1571 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 ARHGAP42A6NI28 874 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 GGCXP38435 758 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 GRIN1Q05586 938 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 MSTO1Q9BUK6 570 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 SPC25Q9HBM1 224 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 DNAJC17Q9NVM6 304 aaKnown RBP11.22□□□□□ -0.61
CTC1-202ENST00000449476 CNOT8Q9UFF9 292 aaKnown RBP11.22□□□□□ -0.61
CTC1-202ENST00000449476 TECPR2O15040 1411 aa11.22□□□□□ -0.61
CTC1-202ENST00000449476 VGLL3A8MV65 326 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 TXNDC9O14530 226 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 JAK3P52333 1124 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 STK4Q13043 487 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 CDKL2Q92772 493 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 SEL1LQ9UBV2 794 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 ANAPC7Q9UJX3 599 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 WDR64B1ANS9 1081 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 PODXLO00592 558 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 MCF2LO15068 1137 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 RHOBTB3O94955 611 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 NTSR2O95665 410 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 SLC8A1P32418 973 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 GPC5P78333 572 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 BASP1P80723 227 aaKnown RBP11.21□□□□□ -0.61
CTC1-202ENST00000449476 DRAP1Q14919 205 aaPredicted RBP11.21□□□□□ -0.61
CTC1-202ENST00000449476 MICAL1Q8TDZ2 1067 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 TCP11Q8WWU5 503 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
CTC1-202ENST00000449476 SLC16A4O15374 487 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 ACSL3O95573 720 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 SLFN12LQ6IEE8 588 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 DPP9Q86TI2 863 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 MCPH1Q8NEM0 835 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 DDX47Q9H0S4 455 aaKnown RBP11.21□□□□□ -0.62
CTC1-202ENST00000449476 RAVER2Q9HCJ3 691 aaKnown RBP11.21□□□□□ -0.62
CTC1-202ENST00000449476 PACSIN2Q9UNF0 486 aaPredicted RBP11.21□□□□□ -0.62
CTC1-202ENST00000449476 SYNGAP1Q96PV0 1343 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 IPO5O00410 1097 aaKnown RBP11.21□□□□□ -0.62
CTC1-202ENST00000449476 PDE1BQ01064 536 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 PDXDC1Q6P996 788 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 SP8Q8IXZ3 490 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 C7orf31Q8N865 590 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.62
CTC1-202ENST00000449476 CFAP57Q96MR6 1250 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 DIS3Q9Y2L1 958 aaKnown RBP11.21□□□□□ -0.62
CTC1-202ENST00000449476 DAGLAQ9Y4D2 1042 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 ABCB11O95342 1321 aa11.21□□□□□ -0.62
CTC1-202ENST00000449476 EXOC1LA0A1B0GW35 172 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms