RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 PICALMQ13492 652 aa9.9□□□□□ -0.82
SMC6-207ENST00000448223 UBE3CQ15386 1083 aa9.9□□□□□ -0.82
SMC6-207ENST00000448223 U2AF1L4Q8WU68 220 aaKnown RBP9.9□□□□□ -0.82
SMC6-207ENST00000448223 SGSM3Q96HU1 749 aa9.9□□□□□ -0.82
SMC6-207ENST00000448223 NWD1Q149M9 1564 aa9.9□□□□□ -0.82
SMC6-207ENST00000448223 NALCNQ8IZF0 1738 aa9.9□□□□□ -0.82
SMC6-207ENST00000448223 A0A0G2JND7 137 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 E7ENQ6 273 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 EIF3HO15372 352 aaKnown RBP eCLIP9.9□□□□□ -0.832e-6■■■□□ 15.9
SMC6-207ENST00000448223 SKAP2O75563 359 aaPredicted RBP9.9□□□□□ -0.83
SMC6-207ENST00000448223 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.83
SMC6-207ENST00000448223 STX1BP61266 288 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 CHRNDQ07001 517 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 CUL1Q13616 776 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 MORC3Q14149 939 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 CYTH1Q15438 398 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.9□□□□□ -0.831e-8■■■■■ 39.9
SMC6-207ENST00000448223 MAML1Q92585 1016 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 RPGRQ92834 1020 aaKnown RBP9.9□□□□□ -0.83
SMC6-207ENST00000448223 EPN3Q9H201 632 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 RAD21L1Q9H4I0 556 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 NDUFA13Q9P0J0 144 aa9.9□□□□□ -0.83
SMC6-207ENST00000448223 H0Y626 953 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 PPP1R37O75864 691 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 IFNAR1P17181 557 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 ITGB3BPQ13352 177 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 SPATA1Q5VX52 437 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 RSAD2Q8WXG1 361 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 TRIM63Q969Q1 353 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 MAGOHBQ96A72 148 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 CRNKL1Q9BZJ0 848 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 ZMYND12Q9H0C1 365 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 SYBUQ9NX95 663 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 MAP3K15Q6ZN16 1313 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 SLIT1O75093 1534 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 NBNO60934 754 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 HSPA8P11142 646 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 CA4P22748 312 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 DEFA1P59665 94 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 DEFA3P59666 94 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 TFAP4Q01664 338 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 STX3Q13277 289 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 RARS2Q5T160 578 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 FMO2Q99518 471 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 L2HGDHQ9H9P8 463 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 MRGBPQ9NV56 204 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 TBK1Q9UHD2 729 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 SALL1Q9NSC2 1324 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 PGRMC1O00264 195 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 GSTA1P08263 222 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 GJA8P48165 433 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 PPM1FP49593 454 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 TEDDM1Q5T9Z0 273 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 PAGE5Q96GU1 130 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 CATSPER2Q96P56 530 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 CCDC90BQ9GZT6 254 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 SMYD3Q9H7B4 428 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 NOD2Q9HC29 1040 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 EPB41L4AQ9HCS5 686 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 ZNF219Q9P2Y4 722 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 PPARGC1AQ9UBK2 798 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 FHOD1Q9Y613 1164 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 SESN1Q9Y6P5 492 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 B4DLN1 442 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 N4BP1O75113 896 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 NCF2P19878 526 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 PTPREP23469 700 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 HP1BP3Q5SSJ5 553 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 RAD9BQ6WBX8 426 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 IGDCC4Q8TDY8 1250 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 ZNF473Q8WTR7 871 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 ZSCAN10Q96SZ4 725 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 TRPV6Q9H1D0 765 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 C6orf50Q9HD87 102 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 PARP3Q9Y6F1 533 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 TOPAZ1Q8N9V7 1692 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 RNF103-CHMP3A0A140T963 221 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 MAGEA13PA6NCF6 341 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 GSG1L2A8MUP6 293 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 NOP56O00567 594 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 H2AFZP0C0S5 128 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 H2AFXP16104 143 aaPredicted RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 ABCB4P21439 1286 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 GUCY1A3Q02108 690 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 SUSD4Q5VX71 490 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 FAM47EQ6ZV65 393 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 H2AFVQ71UI9 128 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 DPH6Q7L8W6 267 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 SUGP1Q8IWZ8 645 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 TC2NQ8N9U0 490 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 RAPGEF5Q92565 580 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 PPP1R14BQ96C90 147 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 ZFYVE19Q96K21 471 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 UNC45AQ9H3U1 944 aa9.89□□□□□ -0.83
SMC6-207ENST00000448223 CACYBPQ9HB71 228 aaKnown RBP9.89□□□□□ -0.83
SMC6-207ENST00000448223 TRIM37O94972 964 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 MLH1P40692 756 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms